Mm01134953_m1

• Gene Symbol: Smarcd3
• Gene Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
• Gene Aliases: 1500001J14Rik, 2210409C08Rik, BAF60C
• Chromosome Location: Chr.5: 24592622 - 24624456 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Smarcd3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_025891.3	NP_080167.3	2 - 3	430		142
GenBank mRNA	AK005094.1	-	2 - 3	377		141
	AK158019.1	-		405		142
	BC013122.1	-	2 - 3	467	3586276	142
	BC060525.1	-	2 - 3	329	6817219	142

More Information

Additional Information:

This assay is in the 5'UTR region of the AK005094.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smarcd3

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

positive regulation of neuroblast proliferation
heart morphogenesis
secondary heart field specification
cardiac right ventricle formation
nucleosome disassembly
chromatin remodeling
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
nervous system development
positive regulation of G2/M transition of mitotic cell cycle
chromatin modification
muscle cell differentiation
regulation of protein binding
positive regulation of transcription, DNA-templated
positive regulation of smooth muscle cell differentiation

Function(s)

chromatin binding
receptor binding
protein binding
transcription factor binding
ligand-dependent nuclear receptor binding
ligand-dependent nuclear receptor transcription coactivator activity
nuclear hormone receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0500019038.mm.1	TC0500002087.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500019038.mm.1	NM_025891.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019038.mm.1	NM_025891.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019040.mm.1	TC0500002087.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500019040.mm.1	NM_025891.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019040.mm.1	NM_025891.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019044.mm.1	TC0500002087.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500019044.mm.1	NM_025891.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019044.mm.1	NM_025891.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019045.mm.1	TC0500002087.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500019045.mm.1	NM_025891.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019045.mm.1	NM_025891.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019037.mm.1	TC0500002087.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500019037.mm.1	NM_025891.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019037.mm.1	NM_025891.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019042.mm.1	TC0500002087.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500019042.mm.1	NM_025891.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019042.mm.1	NM_025891.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019046.mm.1	TC0500002087.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500019046.mm.1	NM_025891.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500019046.mm.1	NM_025891.3	Refseq