Mm01135934_g1 Best Coverage

• Gene Symbol: B4galnt1
• Gene Name: beta-1,4-N-acetyl-galactosaminyl transferase 1
• Gene Aliases: 4933429D13Rik, Gal-NAc-T, GalNAc-T, GalNAcT, Galgt1, Ggm-2, Ggm2
• Chromosome Location: Chr.10: 127165156 - 127172340 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: B4galnt1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001244617.1	NP_001231546.1	5 - 6	890		139
	NM_001244618.1	NP_001231547.1	4 - 5	699		139
	NM_008080.5	NP_032106.1	5 - 6	890		139
	NM_027739.2	NP_082015.2	4 - 5	699		139
GenBank mRNA	AK040324.1	-	4 - 5	700		139
	AK086849.1	-	4 - 5	671		139
	AK144484.1	-	5 - 6	856		139
	BC022180.1	-	5 - 6	678		139
	BC036996.1	-	4 - 5	624	5038560	139
	BC057199.1	-	5 - 6	821	5315443	139
	L25885.1	-	4 - 5	653		139
	U18975.1	-	4 - 5	528		139

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1000001551.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene B4galnt1

Gene Ontology Categories:

Process(es)

ganglioside biosynthetic process
glycosphingolipid metabolic process
spermatogenesis
lipid storage
lipid glycosylation

Function(s)

(N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity
acetylgalactosaminyltransferase activity
transferase activity
transferase activity, transferring glycosyl groups
transferase activity, transferring hexosyl groups

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1000011012.mm.1	NM_001244617.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011012.mm.1	NM_001244617.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011012.mm.1	NM_001244618.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011012.mm.1	NM_001244618.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011012.mm.1	TC1000001551.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1000011011.mm.1	NM_001244617.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011011.mm.1	NM_001244617.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011011.mm.1	NM_001244618.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011011.mm.1	NM_001244618.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011011.mm.1	NM_008080.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011011.mm.1	NM_008080.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011011.mm.1	NM_027739.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011011.mm.1	NM_027739.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1000011011.mm.1	TC1000001551.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	483005	-	-