Mm01171146_g1 Best Coverage

• Gene Symbol: Trmt2a
• Gene Name: TRM2 tRNA methyltransferase 2A
• Gene Aliases: Htf9c
• Chromosome Location: Chr.16: 18248830 - 18254772 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Trmt2a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001080999.2	NP_001074468.1	2 - 3	920		58
	NM_001081000.2	NP_001074469.1	2 - 3	967		58
	NM_001195205.1	NP_001182134.1	2 - 3	920		58
GenBank mRNA	AK034102.1	-	2 - 3	800		58
	AK080170.1	-	2 - 3	795		58
	AK133844.1	-	2 - 3	795		58
	AK134368.1	-	2 - 3	921		58
	AK146391.1	-	2 - 3	860		58
	AK150482.1	-	2 - 3	765		58
	AK151311.1	-	2 - 3	765		58
	AK151422.1	-	2 - 3	791		58
	AK151725.1	-	2 - 3	765		58
	AK151778.1	-	2 - 3	765		58
	AK152055.1	-	2 - 3	765		58
	AK152201.1	-	2 - 3	765		58
	AK152363.1	-	2 - 3	765		58
	AK152548.1	-	2 - 3	765		58
	AK152903.1	-	2 - 3	765		58
	AK153043.1	-	2 - 3	765		58
	AK153190.1	-	2 - 3	791		58
	AK169240.1	-	2 - 3	785		58
	BC027431.1	-	1 - 2	1032	3156359	58
	BC038486.1	-	2 - 3	793	3155739	58
	BC046976.1	-	2 - 3	801	6337243	58

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Mus musculus, Probe spans exons

Panther Classification:

Molecular Function -

RNA methyltransferase

Gene Ontology Categories:

Process(es)

RNA processing
methylation

Function(s)

nucleotide binding
rRNA (adenine-N6,N6-)-dimethyltransferase activity
nucleic acid binding
RNA binding
protein C-terminal carboxyl O-methyltransferase activity
tRNA (guanine-N2-)-methyltransferase activity
methyltransferase activity
C-methyltransferase activity
N-methyltransferase activity
O-methyltransferase activity
S-methyltransferase activity
RNA methyltransferase activity
mRNA methyltransferase activity
tRNA methyltransferase activity
protein methyltransferase activity
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
rRNA methyltransferase activity
rRNA (uridine-2'-O-)-methyltransferase activity
rRNA (adenine-N6-)-methyltransferase activity
DNA-methyltransferase activity
tRNA (guanine-N1-)-methyltransferase activity
rRNA (cytosine-C5-)-methyltransferase activity
selenocysteine methyltransferase activity
arginine N-methyltransferase activity
protein-arginine N-methyltransferase activity
lysine N-methyltransferase activity
protein-lysine N-methyltransferase activity
tRNA (uracil) methyltransferase activity
tRNA (guanine) methyltransferase activity
tRNA (adenine) methyltransferase activity
tRNA (cytosine) methyltransferase activity
tRNA (cytosine-5-)-methyltransferase activity
tRNA (adenine-N1-)-methyltransferase activity
rRNA (adenine) methyltransferase activity
rRNA (cytosine) methyltransferase activity
rRNA (guanine) methyltransferase activity
rRNA (uridine) methyltransferase activity
transferase activity
protein C-terminal leucine carboxyl O-methyltransferase activity
1-phenanthrol methyltransferase activity
protein-arginine N5-methyltransferase activity
methylarsonite methyltransferase activity
dimethylarsinite methyltransferase activity
4,5-dihydroxybenzo(a)pyrene methyltransferase activity
1-hydroxypyrene methyltransferase activity
1-hydroxy-6-methoxypyrene methyltransferase activity
demethylmenaquinone methyltransferase activity
cobalt-precorrin-6B C5-methyltransferase activity
cobalt-precorrin-7 C15-methyltransferase activity
cobalt-precorrin-5B C1-methyltransferase activity
cobalt-precorrin-3 C17-methyltransferase activity
dimethylamine methyltransferase activity
hydroxyneurosporene-O-methyltransferase activity
tRNA (adenine-57, 58-N(1)-) methyltransferase activity
methylamine-specific methylcobalamin:coenzyme M methyltransferase activity
trimethylamine methyltransferase activity
methanol-specific methylcobalamin:coenzyme M methyltransferase activity
monomethylamine methyltransferase activity
poly(A) RNA binding
P-methyltransferase activity
Se-methyltransferase activity
2-phytyl-1,4-naphthoquinone methyltransferase activity
tRNA (uracil-2'-O-)-methyltransferase activity
tRNA (cytosine-2'-O-)-methyltransferase activity
phosphomethylethanolamine N-methyltransferase activity
tRNA (cytosine-3-)-methyltransferase activity
rRNA (cytosine-2'-O-)-methyltransferase activity
rRNA (cytosine-N4-)-methyltransferase activity
trihydroxyferuloyl spermidine O-methyltransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1600002122.mm.1	NM_001080999.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600002122.mm.1	NM_001080999.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1600002122.mm.1	NM_001081000.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600002122.mm.1	NM_001081000.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1600002122.mm.1	NM_001195205.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600002122.mm.1	NM_001195205.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600002122.mm.1	TC1600000238.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600002117.mm.1	NM_001081000.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600002117.mm.1	NM_001081000.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1600002117.mm.1	TC1600000238.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600002118.mm.1	TC1600000238.mm.1	MTA TC