Mm01179091_m1

• Gene Symbol: Paf1
• Gene Name: Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
• Gene Aliases: 5730511K23Rik, AA675045
• Chromosome Location: Chr.7: 28392996 - 28399383 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Paf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019458.3	NP_062331.2	2 - 3	289		67
GenBank mRNA	AB041615.1	-	2 - 3	307		67
	AK017762.1	-	2 - 3	359		67
	AK134857.1	-	2 - 3	302		67
	AK148538.1	-	2 - 3	324		67
	AK151665.1	-	2 - 3	336		67
	AK152778.1	-	2 - 3	305		67
	AK152836.1	-	2 - 3	336		67
	BC010317.1	-	2 - 3	244		67
	BC029843.1	-	2 - 3	289	2651081	67
	BC083337.1	-	2 - 3	270	5701517	67

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700000498.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Paf1

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
endodermal cell fate commitment
transcription, DNA-templated
regulation of transcription, DNA-templated
mRNA polyadenylation
histone monoubiquitination
Wnt signaling pathway
nucleosome positioning
stem cell population maintenance
positive regulation of histone methylation
positive regulation of mRNA 3'-end processing
positive regulation of transcription elongation from RNA polymerase II promoter
histone H2B ubiquitination
protein localization to nucleus
negative regulation of myeloid cell differentiation
positive regulation of transcription by RNA polymerase II
cellular response to lipopolysaccharide

Function(s)

RNA polymerase II complex binding
chromatin binding
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0700004025.mm.1	TC0700000498.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700004025.mm.1	NM_019458.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700004025.mm.1	NM_019458.3	Refseq