Mm01179094_g1

• Gene Symbol: Paf1
• Gene Name: Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
• Gene Aliases: 5730511K23Rik, AA675045
• Chromosome Location: Chr.7: 28392996 - 28399383 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Paf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019458.3	NP_062331.2	6 - 7	675		115
GenBank mRNA	AB041615.1	-	6 - 7	693		115
	AK017762.1	-	6 - 7	745		115
	AK134857.1	-	6 - 7	688		115
	AK148538.1	-	6 - 7	710		115
	AK151665.1	-	6 - 7	721		115
	AK152778.1	-	6 - 7	691		115
	AK152836.1	-	6 - 7	721		115
	BC010317.1	-	5 - 6	719		115
	BC029843.1	-	6 - 7	675	2651081	115
	BC083337.1	-	6 - 7	656	5701517	115

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700000498.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Paf1

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
endodermal cell fate commitment
transcription, DNA-templated
regulation of transcription, DNA-templated
mRNA polyadenylation
histone monoubiquitination
Wnt signaling pathway
nucleosome positioning
stem cell population maintenance
positive regulation of histone methylation
positive regulation of mRNA 3'-end processing
positive regulation of transcription elongation from RNA polymerase II promoter
histone H2B ubiquitination
protein localization to nucleus
negative regulation of myeloid cell differentiation
positive regulation of transcription by RNA polymerase II
cellular response to lipopolysaccharide

Function(s)

RNA polymerase II complex binding
chromatin binding
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0700004034.mm.1	TC0700000498.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700004034.mm.1	NM_019458.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700004034.mm.1	NM_019458.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0700004036.mm.1	TC0700000498.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700004036.mm.1	NM_019458.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700004036.mm.1	NM_019458.3	Refseq