Mm01179095_g1

• Gene Symbol: Paf1
• Gene Name: Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
• Gene Aliases: 5730511K23Rik, AA675045
• Chromosome Location: Chr.7: 28392996 - 28399383 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Paf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019458.3	NP_062331.2	8 - 9	849		76
GenBank mRNA	AK017762.1	-	8 - 9	919		76
	AK134857.1	-	8 - 9	862		76
	AK148538.1	-	8 - 9	884		76
	AK151665.1	-	8 - 9	895		76
	AK152778.1	-	8 - 9	865		76
	AK152836.1	-	8 - 9	895		76
	BC010317.1	-	7 - 8	893		76
	BC029843.1	-	8 - 9	849	2651081	76
	BC083337.1	-	8 - 9	830	5701517	76

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700000498.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Paf1

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
endodermal cell fate commitment
transcription, DNA-templated
regulation of transcription, DNA-templated
mRNA polyadenylation
histone monoubiquitination
Wnt signaling pathway
nucleosome positioning
stem cell population maintenance
positive regulation of histone methylation
positive regulation of mRNA 3'-end processing
positive regulation of transcription elongation from RNA polymerase II promoter
histone H2B ubiquitination
protein localization to nucleus
negative regulation of myeloid cell differentiation
positive regulation of transcription by RNA polymerase II
cellular response to lipopolysaccharide

Function(s)

RNA polymerase II complex binding
chromatin binding
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0700004040.mm.1	TC0700000498.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700004040.mm.1	NM_019458.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700004040.mm.1	NM_019458.3	Refseq