Mm01180221_g1

Gene Symbol:

Gapdh Gm12070 Gm5523 Gm6981

Gene Name:

glyceraldehyde-3-phosphate dehydrogenase

glyceraldehyde-3-phosphate dehydrogenase pseudogene

glyceraldehyde-3-phosphate dehydrogenase pseudogene

glyceraldehyde-3-phosphate dehydrogenase pseudogene

Gene Aliases:

Gapd

OTTMUSG00000005300

EG433273

EG629557

Chromosome Location:

Chr.6: 125161338 - 125166511 on Build GRCm38

Chromosome Location:

Chr.11: 26785108 - 26787860 on Build GRCm38

Chromosome Location:

Chr.1: 13785685 - 13786929 on Build GRCm38

Chromosome Location:

Chr.9: 52002061 - 52048705 on Build GRCm38

Species:

Mouse

Species Specific ID (Flybase ID):

-

-

-

-

Assay Details

Gene Symbol: Gapdh
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001289726.1	NP_001276655.1	4	527		80
	NM_008084.3	NP_032110.1	4	675		80
GenBank mRNA	AK002273.1	-	4	508		80
	AK081405.1	-	4	508		80
	AK140794.1	-	4	508		80
	AK144690.1	-	4	529		80
	AK146435.1	-	4	508		80
	AK147738.1	-	4	508		80
	AK147891.1	-	4	508		80
	AK160399.1	-	4	508		80
	AK164415.1	-	4	506		80
	AK168217.1	-	4	508		80
	AK169742.1	-	1	2078		80
	AK178680.1	-	1	76		80
	AK184664.1	-	1	77		80
	AK184690.1	-	1	85		80
	AK197268.1	-	1	76		80
	AK200636.1	-	1	76		80
	AK201486.1	-	1	76		80
	AK204478.1	-	1	77		80
	BC020407.1	-	4	496		80
	BC023196.1	-	4	506		80
	BC082592.1	-	4	485	30634381	80
	BC083065.1	-	4	484	5371133	80
	BC083079.1	-	4	490	6493407	80
	BC083080.1	-	4	492	6494145	80
	BC083149.1	-		471	30459585	80
	BC085274.1	-		493	6530979	80
	BC085275.1	-	4	502	30444086	80
	BC091768.1	-		471	4159824	80
	BC092252.1	-	4	494	5044783	80
	BC092264.1	-		496	2655526	80
	BC092267.1	-		482	4010884	80
	BC092294.1	-		485	5068049	80
	BC093508.1	-		465	4975394	80
	BC094037.1	-		472	5009636	80
	BC095932.1	-	4	496	30733532	80
	BC096440.1	-	4	496	2649847	80
	BC096590.1	-		496	6486174	80
	BC110311.1	-	4	497	5340298	80
	BC145810.1	-	4	478	40131113	80
	BC145812.1	-	4	478	40131115	80
	BU504528.1	-		493		80
	DQ403054.1	-	2	366		80
	GU214026.1	-	4	506		80
	M32599.1	-	4	481		80

Gene Symbol: Gm12070
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002890.1		2	854		80
GenBank mRNA	BC098095.1	-	2	854		80

Gene Symbol: Gm5523
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_004447.1		1	480		80
GenBank mRNA	AK188672.1	-		85		80
	AK193983.1	-		76		80

Gene Symbol: Gm6981
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_023357.1		3			80
GenBank mRNA	AK132984.1	-	3			80

More Information

• Set Membership: Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Inventoried, Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Process(es)

microtubule cytoskeleton organization
carbohydrate metabolic process
gluconeogenesis
glycolytic process
apoptotic process
multicellular organism development
negative regulation of translation
peptidyl-cysteine S-trans-nitrosylation
protein stabilization
neuron apoptotic process
oxidation-reduction process
response to ammonium ion
cellular response to interferon-gamma

Function(s)

glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
microtubule binding
peptidyl-cysteine S-nitrosylase activity
identical protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2106956	NR_004447.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2034600	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2034600	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Gene 1.0 ST Array	10455781	-	-
Affymetrix Mouse Gene 1.0 ST Array	10353191	-	-
Affymetrix Mouse Gene 1.0 ST Array	10426436	-	-
Affymetrix Mouse Gene 1.0 ST Array	10492659	-	-
Affymetrix Mouse Gene 1.0 ST Array	10463065	-	-
Affymetrix Mouse Gene 1.0 ST Array	10353190	-	-
Affymetrix Mouse Gene 1.0 ST Array	10601568	-	-
Affymetrix Mouse Gene 1.1 ST Array	10353189	-	-
Affymetrix Mouse Clariom S Array	PSR0100016232.mm.1	NR_004447.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100016232.mm.1	TC0100001983.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100016233.mm.1	NR_004447.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100016233.mm.1	TC0100001983.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100016231.mm.1	NR_004447.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100016231.mm.1	TC0100001983.mm.1	MTA TC
Mouse Expression Set 430	1418625_PM_s_at	-	-
Mouse Expression Set 430	1418625_s_at	-	-
Mouse Genome 430A 2.0 Array	1418625_s_at	-	-
Mouse Genome 430A 2.0 Array	1418625_PM_s_at	-	-