Mm01184338_m1 Best Coverage

• Gene Symbol: Mbd4
• Gene Name: methyl-CpG binding domain protein 4
• Gene Aliases: Med1
• Chromosome Location: Chr.6: 115840697 - 115853438 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Mbd4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_010774.2	NP_034904.2	2 - 3	425		79
GenBank mRNA	AF072249.1	-	2 - 3	442		79
	AK148171.1	-	2 - 3	373		79
	AK161005.1	-	2 - 3	901		79
	BC024812.1	-	2 - 3	407	5356016	79
	BQ885775.1	-	2 - 3	425		79

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600002963.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Mbd4

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)

DNA repair
base-excision repair
DNA methylation
cellular response to DNA damage stimulus
mitotic G2 DNA damage checkpoint
intrinsic apoptotic signaling pathway in response to DNA damage
response to radiation

Function(s)

purine-specific mismatch base pair DNA N-glycosylase activity
DNA binding
catalytic activity
uracil DNA N-glycosylase activity
pyrimidine-specific mismatch base pair DNA N-glycosylase activity
hydrolase activity
single-strand selective uracil DNA N-glycosylase activity
DNA N-glycosylase activity
DNA-3-methylbase glycosylase activity
nicotinamide riboside hydrolase activity
nicotinic acid riboside hydrolase activity
deoxyribonucleoside 5'-monophosphate N-glycosidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0600022782.mm.1	TC0600002963.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600022782.mm.1	NM_010774.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022782.mm.1	NM_010774.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022783.mm.1	TC0600002963.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600022783.mm.1	NM_010774.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022783.mm.1	NM_010774.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022779.mm.1	TC0600002963.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600022779.mm.1	NM_010774.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022779.mm.1	NM_010774.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022780.mm.1	TC0600002963.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600022780.mm.1	NM_010774.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022780.mm.1	NM_010774.2	Refseq