Mm01186497_m1

• Gene Symbol: Gm5577
• Gene Name: predicted gene 5577
• Gene Aliases: EG434064
• Chromosome Location: Chr.6: 87981683 - 87984180 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gm5577
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_026990.1		1 - 2	202		112
GenBank mRNA	AK020089.1	-		204		112
	AK048951.1	-	1 - 2	174		112

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BB650272.1	-	1 - 2	174		Chr. 6 - 87981712 - 87983439 [+] on Build GRCm38	112

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	H1 histone family, member X	H1fx	Gm461, H1.10, H1X	-230.0	Anti-sense	Chr. 6 - 87980421 - 87981482 on NCBI Build GRCm38
Downstream	RAB7, member RAS oncogene family	Rab7	Rab7a	15.7kb	Anti-sense	Chr. 6 - 87999106 - 88045270 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600001022.mm.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Mus musculus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P386829	AK042699.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P386829	AK048951.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P386829	NR_026990.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P386829	AK042699.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P386829	AK048951.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P386829	NR_026990.1	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	752750	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	460658	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	138772	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P143388	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P176031	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P386829	AK042699.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P386829	AK048951.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P386829	NR_026990.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P386829	AK042699.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P386829	AK048951.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P386829	NR_026990.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P386829	AK042699.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P386829	AK048951.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P386829	NR_026990.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P386829	AK042699.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P386829	AK048951.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P386829	NR_026990.1	mouse_transcriptome

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Gene 1.0 ST Array	10539858	-	-
Affymetrix Mouse Gene 1.0 ST Array	10539859	-	-
Affymetrix Mouse Gene 1.0 ST Array	10539860	-	-
Affymetrix Mouse Gene 1.1 ST Array	10539857	-	-
Affymetrix Mouse Clariom S Array	PSR0600008024.mm.1	TC0600001022.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600008024.mm.1	NR_026990.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600008024.mm.1	NR_026990.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600008023.mm.1	TC0600001022.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600008023.mm.1	NR_026990.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600008023.mm.1	NR_026990.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600008025.mm.1	TC0600001022.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600008025.mm.1	NR_026990.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600008025.mm.1	NR_026990.1	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	741369	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina mouse-6 v1.0 expression beadchip	105860102	-	-
Illumina Sentrix mouse-6.v1 bead array	105860102	-	-
Illumina Sentrix Mouse-6 Expression BeadChip (2)	105860102	-	-
Illumina MouseWG-6 v2.0 expression beadchip	ILMN_1257810	-	-