Mm01187303_m1 Best Coverage

• Gene Symbol: Atg5
• Gene Name: autophagy related 5
• Gene Aliases: 2010107M05Rik, 3110067M24Rik, AW319544, Apg5l, Atg5l, C88337, Paddy
• Chromosome Location: Chr.10: 44268358 - 44364299 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atg5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053069.5	NP_444299.1	5 - 6	764		65
GenBank mRNA	AB048349.1	-	4 - 5	479		65
	AK028315.1	-	5 - 6	766		65
	AK207331.1	-	1 - 2	121		65
	BC002166.1	-	5 - 6	630	3486093	65

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1000000413.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Apoptosis, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atg5

Panther Classification:

Molecular Function -

membrane trafficking regulatory protein

Gene Ontology Categories:

Process(es)

autophagosome assembly
mitophagy
blood vessel remodeling
immune system process
regulation of cytokine secretion involved in immune response
C-terminal protein lipidation
autophagy
apoptotic process
cellular response to nitrogen starvation
response to fungus
negative regulation of protein ubiquitination
negative stranded viral RNA replication
vasodilation
response to drug
negative regulation of apoptotic process
post-translational protein modification
nucleophagy
innate immune response
otolith development
regulation of release of sequestered calcium ion into cytosol
ventricular cardiac muscle cell development
heart contraction
positive regulation of mucus secretion
regulation of cilium assembly
positive regulation of mitophagy
regulation of reactive oxygen species metabolic process
negative regulation of reactive oxygen species metabolic process
negative regulation of histone H4-K16 acetylation

Function(s)

protein binding
Atg8 ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1000002818.mm.1	NM_053069.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1000002818.mm.1	TC1000000413.mm.1	MTA TC