Mm01193535_m1

• Gene Symbol: Mecp2
• Gene Name: methyl CpG binding protein 2
• Gene Aliases: 1500041B07Rik, D630021H01Rik, Mbd5, WBP10
• Chromosome Location: Chr.X: 74026592 - 74085690 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Mecp2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_010788.4	NP_034918.1	1 - 2	177		67
GenBank mRNA	AF158181.1	-	1 - 2	80		67
	BC027153.1	-	1 - 2	99	4948925	67

More Information

Additional Information:

This assay is in the 5'UTR region of the AF158181.1, BC027153.1, NM_010788.4 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Mecp2

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
behavioral fear response
response to hypoxia
startle response
neurological system process involved in regulation of systemic arterial blood pressure
regulation of respiratory gaseous exchange by neurological system process
inositol metabolic process
mitochondrial electron transport, ubiquinol to cytochrome c
chromatin silencing
regulation of gene expression by genetic imprinting
transcription, DNA-templated
regulation of transcription, DNA-templated
glutamine metabolic process
cellular biogenic amine metabolic process
chemical synaptic transmission
synapse assembly
brain development
respiratory gaseous exchange
learning
memory
long-term memory
protein localization
glucocorticoid metabolic process
positive regulation of cell proliferation
adult locomotory behavior
visual learning
pathogenesis
embryo development
post-embryonic development
regulation of gene expression
dendrite development
histone methylation
histone acetylation
proprioception
sensory perception of pain
cerebellum development
ventricular system development
neuron differentiation
negative regulation of histone methylation
neuron projection development
cardiolipin metabolic process
multicellular organismal response to stress
negative regulation of histone acetylation
social behavior
regulation of gene expression, epigenetic
neuron maturation
negative regulation of neuron apoptotic process
regulation of DNA methylation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
phosphatidylcholine metabolic process
regulation of synaptic plasticity
negative regulation of astrocyte differentiation
catecholamine secretion
neuromuscular process controlling posture
neuromuscular process
positive regulation of synapse assembly
excitatory postsynaptic potential
long-term synaptic potentiation

Function(s)

four-way junction DNA binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
mRNA binding
protein binding
transcription factor binding
methyl-CpG binding
double-stranded methylated DNA binding
enzyme binding
protein domain specific binding
chromatin DNA binding
siRNA binding
histone deacetylase binding
poly(A) RNA binding
unmethylated CpG binding
protein N-terminus binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00015439.mm.1	NM_001081979.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00015439.mm.1	NM_010788.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00015439.mm.1	TC0X00003432.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00015440.mm.1	NM_010788.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00015440.mm.1	TC0X00003432.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00015444.mm.1	NM_001081979.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00015444.mm.1	NM_010788.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00015444.mm.1	TC0X00003432.mm.1	MTA TC