Mm01197623_m1

• Gene Symbol: Patl1
• Gene Name: protein associated with topoisomerase II homolog 1 (yeast)
• Gene Aliases: AV312086, Pat1b
• Chromosome Location: Chr.19: 11912399 - 11945096 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Patl1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_172635.3	NP_766223.2	2 - 3	290		96
GenBank mRNA	AK087559.1	-	2 - 3	254		96
	AK150301.1	-	2 - 3	291		96
	AK154102.1	-	2 - 3	288		96
	AK154873.1	-	2 - 3	240		96
	AK170408.1	-	2 - 3	254		96
	AK170745.1	-	2 - 3	255		96
	AK170918.1	-	2 - 3	291		96
	BC058941.1	-	2 - 3	231	6825758	96

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900000235.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Patl1

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

deadenylation-dependent decapping of nuclear-transcribed mRNA
negative regulation of translation
cytoplasmic mRNA processing body assembly

Function(s)

G-quadruplex RNA binding
RNA binding
poly(U) RNA binding
translation repressor activity
poly(G) binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1900002836.mm.1	NM_172635.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002836.mm.1	NM_172635.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002836.mm.1	TC1900000235.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900002833.mm.1	NM_172635.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002833.mm.1	NM_172635.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002833.mm.1	TC1900000235.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900002835.mm.1	NM_172635.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002835.mm.1	NM_172635.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002835.mm.1	TC1900000235.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900002834.mm.1	NM_172635.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002834.mm.1	NM_172635.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002834.mm.1	TC1900000235.mm.1	MTA TC