Mm01197626_m1 Best Coverage

• Gene Symbol: Patl1
• Gene Name: protein associated with topoisomerase II homolog 1 (yeast)
• Gene Aliases: AV312086, Pat1b
• Chromosome Location: Chr.19: 11912399 - 11945096 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Patl1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_172635.3	NP_766223.2	8 - 9	1199		65
GenBank mRNA	AK085013.1	-	8 - 9	1141		65
	AK087559.1	-	8 - 9	1163		65
	AK150301.1	-	8 - 9	1200		65
	AK154102.1	-	8 - 9	1197		65
	AK154873.1	-	8 - 9	1151		65
	AK161738.1	-	1 - 2	160		65
	AK170408.1	-	8 - 9	1163		65
	AK170745.1	-	8 - 9	1164		65
	AK170918.1	-	8 - 9	1200		65
	BC047458.1	-	8 - 9	1001		65
	BC058941.1	-	8 - 9	1140	6825758	65

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900000235.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Patl1

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

deadenylation-dependent decapping of nuclear-transcribed mRNA
negative regulation of translation
cytoplasmic mRNA processing body assembly

Function(s)

G-quadruplex RNA binding
RNA binding
poly(U) RNA binding
translation repressor activity
poly(G) binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1900002843.mm.1	NM_172635.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002843.mm.1	NM_172635.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002843.mm.1	TC1900000235.mm.1	MTA TC