Mm01197689_m1 Best Coverage

• Gene Symbol: Stx3
• Gene Name: syntaxin 3
• Gene Aliases: Syn-3
• Chromosome Location: Chr.19: 11775118 - 11820422 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Stx3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001025307.1	NP_001020478.1	6 - 7	1149		63
	NM_001286543.1	NP_001273472.1	7 - 8	1195		63
	NM_011502.3	NP_035632.1	6 - 7	1095		63
	NM_152220.2	NP_689344.1	6 - 7	1149		63
GenBank mRNA	AK133830.1	-	6 - 7	672		63
	AK170105.1	-	6 - 7	558		63
	AK171135.1	-	6 - 7	692		63
	BC024844.1	-	6 - 7	557	5357204	63
	BC056949.1	-	7 - 8	1195		63
	D29797.1	-	6 - 7	570		63
	D29798.1	-	6 - 7	568		63
	D29799.1	-	6 - 7	583		63
	D29800.1	-	7 - 8	527		63

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900001144.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Stx3

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Process(es)

transport
neurotransmitter transport
intracellular protein transport
exocytosis
positive regulation of cell proliferation
vesicle-mediated transport
neuron projection development
synaptic vesicle fusion to presynaptic active zone membrane
positive regulation of cell adhesion
vesicle docking
positive regulation of chemotaxis
long-term synaptic potentiation
membrane fusion
positive regulation of protein localization to plasma membrane
positive regulation of protein localization to cell surface

Function(s)

SNARE binding
SNAP receptor activity
protein binding
arachidonic acid binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1900010740.mm.1	NM_001025307.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900010740.mm.1	NM_001025307.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900010740.mm.1	NM_001286543.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900010740.mm.1	NM_011502.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900010740.mm.1	NM_152220.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1900010740.mm.1	TC1900001144.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900010739.mm.1	NM_001025307.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900010739.mm.1	NM_001025307.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900010739.mm.1	NM_001286543.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900010739.mm.1	NM_011502.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900010739.mm.1	NM_152220.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1900010739.mm.1	TC1900001144.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	438084	-	-