Trim56
Genomic Map
Back To TopAssay Details
| Gene Symbol: Trim56 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_201373.4 | NP_958761.1 | 2 - 3 | 261 | 72 | |
| GenBank mRNA | AK037350.1 | - | 2 - 3 | 262 | 72 | |
| BC045615.1 | - | 2 - 3 | 251 | 4976515 | 72 | |
Back To TopMore Information
Additional Information:
This assay is in the 5'UTR region of the AK037350.1, BC045615.1, NM_201373.4 transcripts.
Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
3' Most
Mammalian Gene Collection
Detect Genomic DNA
Mus musculus
1700
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
immune system process
interferon-beta production
response to type I interferon
innate immune response
negative regulation of viral entry into host cell
defense response to virus
protein K63-linked ubiquitination
negative regulation of viral release from host cell
ubiquitin-protein transferase activity
protein binding
zinc ion binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
poly(A) RNA binding
metal ion binding
ubiquitin protein ligase activity
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity
immune system process
interferon-beta production
response to type I interferon
innate immune response
negative regulation of viral entry into host cell
defense response to virus
protein K63-linked ubiquitination
negative regulation of viral release from host cell
ubiquitin-protein transferase activity
protein binding
zinc ion binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
poly(A) RNA binding
metal ion binding
ubiquitin protein ligase activity
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2139763 | BC045615.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 724708 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 346584 | BC039782.1 | genbank_mrna_mouse |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P106283 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2139763 | BC045615.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P244820 | BC045615.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P244820 | AK037350.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P244820 | NM_201373.3 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124668 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124645 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124642 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124662 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124670 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124653 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124650 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124657 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124682 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124672 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124646 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124665 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124651 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124648 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124656 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124658 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124654 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124680 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124676 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124661 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124643 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124666 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124660 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124655 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24124674 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P106283 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P05759854 | - | - |
| Whole Mouse Genome G4122A | A_51_P244820 | BC045615.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P244820 | AK037350.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P244820 | NM_201373.3 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P112484 | - | - |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P129681 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P106283 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P04593668 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P04321860 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P04593665 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P04593667 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P04321859 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124665 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124583 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124617 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124629 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124628 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124611 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124632 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124670 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124602 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124595 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124579 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124705 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124682 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124626 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124606 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124620 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124572 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124570 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124643 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124657 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124633 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124639 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124618 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124609 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124635 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124564 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124666 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124614 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124590 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124688 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124687 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124612 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124650 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124674 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124625 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124627 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124680 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124597 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124630 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124640 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124663 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124586 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124571 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124702 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124655 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124658 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124646 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124676 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124661 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124653 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124593 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124660 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124645 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124622 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24124648 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04123614 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124643 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124567 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124684 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124585 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04668643 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124630 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124620 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04679995 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124622 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04679994 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04668641 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124665 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124589 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124648 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124577 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124614 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124586 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124618 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124678 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124639 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124591 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124668 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04904734 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124579 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124657 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124688 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124672 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04679997 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124674 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124629 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124691 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124653 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124689 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04392916 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124607 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124571 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124642 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124658 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04575903 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124676 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04497969 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124565 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124617 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124568 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124663 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124660 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124575 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124636 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124626 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04678755 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124681 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124683 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124646 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124685 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04321804 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124603 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124632 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124655 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04668640 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124625 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124680 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04399426 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04672990 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124611 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124661 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124572 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04672973 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124666 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124633 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124578 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04672975 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124580 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124690 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24124671 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04679998 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10534683 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10534680 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10534682 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10534681 | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10534679 | - | - |
| Affymetrix Mouse Clariom S Array | PSR0500031113.mm.1 | TC0500003433.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500031113.mm.1 | NM_201373.4.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500031113.mm.1 | NM_201373.4 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500031116.mm.1 | TC0500003433.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500031116.mm.1 | NM_201373.4.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500031116.mm.1 | NM_201373.4 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500031115.mm.1 | TC0500003433.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500031115.mm.1 | NM_201373.4.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500031115.mm.1 | NM_201373.4 | Refseq |
| Murine Genome U74v2 Set | 131166_at | - | - |
| Murine Genome U74v2 Set | 131166_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 687527 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 1580528 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 1580528 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0001580528 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2441921 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2441921 | - | - |
| mouse-6 v1.1 (Illumina) | scl0384309.1_171-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 1580528 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl0384309.1_171-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 1580528 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2441921 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2441921 | - | - |
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