Mm01203152_m1

• Gene Symbol: Pnkp
• Gene Name: polynucleotide kinase 3'- phosphatase
• Gene Aliases: 1810009G08Rik, PNK
• Chromosome Location: Chr.7: 44857055 - 44862929 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pnkp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001290764.1	NP_001277693.1	4 - 5	666		108
	NM_001290766.1	NP_001277695.1	3 - 4	758		108
	NM_021549.3	NP_067524.2	3 - 4	758		108
GenBank mRNA	AK049992.1	-	3 - 4	561		108
	AK159535.1	-	3 - 4	524		108
	AK159770.1	-	3 - 4	524		108
	AK160020.1	-	3 - 4	524		108
	AK160160.1	-	4 - 5			109
	BC047269.1	-	2 - 3	808		108
	BC057659.1	-	3 - 4	560	2865792	108
	CK628081.1	-	3 - 4	570		108

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700000820.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pnkp

Gene Ontology Categories:

Process(es)

DNA repair
cellular response to DNA damage stimulus
response to oxidative stress
metabolic process
phosphorylation
dephosphorylation
DNA damage response, detection of DNA damage
nucleotide phosphorylation
DNA 3' dephosphorylation involved in DNA repair
polynucleotide 3' dephosphorylation

Function(s)

nucleotide binding
double-stranded DNA binding
catalytic activity
ATP binding
kinase activity
transferase activity
hydrolase activity
nucleotide kinase activity
polynucleotide 3'-phosphatase activity
ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0700006885.mm.1	TC0700000820.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700006885.mm.1	NM_021549.3	Refseq