Mm01208835_m1 Best Coverage

• Gene Symbol: Ppargc1a
• Gene Name: peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
• Gene Aliases: A830037N07Rik, ENSMUSG00000079510, Gm11133, PGC-1, PGC-1v, Pgc-1alpha, Pgc1, Pgco1, Ppargc1
• Chromosome Location: Chr.5: 51454249 - 52115958 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ppargc1a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_008904.2	NP_032930.1	7 - 8	1015		68
	NR_027710.1		7 - 8	1046		68
GenBank mRNA	AB061324.1	-	7 - 8	969		68
	AF049330.1	-	7 - 8	967		68
	AK138668.1	-	7 - 8	1016		68
	AK143753.1	-	7 - 8	967		68
	BC066868.1	-	7 - 8	910	30094033	68
	JX866946.1	-	4 - 5	402		68
	JX866947.1	-	4 - 5	472		68
	JX866948.1	-	7 - 8	934		68

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500002394.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ppargc1a

Panther Classification:

Molecular Function -

transcription cofactor

Gene Ontology Categories:

Process(es)

response to dietary excess
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
mitochondrion organization
positive regulation of mitochondrion organization
response to muscle activity
negative regulation of smooth muscle cell migration
respiratory electron transport chain
positive regulation of cellular metabolic process
circadian regulation of gene expression
cellular response to oxidative stress
regulation of circadian rhythm
negative regulation of neuron apoptotic process
cellular respiration
negative regulation of glycolytic process
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of fatty acid oxidation
rhythmic process
positive regulation of smooth muscle cell proliferation
positive regulation of sequence-specific DNA binding transcription factor activity
negative regulation of neuron death
positive regulation of cellular respiration
positive regulation of mitochondrial DNA metabolic process
positive regulation of muscle tissue development
negative regulation of receptor activity
regulation of N-methyl-D-aspartate selective glutamate receptor activity
positive regulation of energy homeostasis
positive regulation of ATP biosynthetic process

Function(s)

nucleotide binding
RNA polymerase II transcription cofactor activity
nucleic acid binding
DNA binding
chromatin binding
transcription coactivator activity
RNA binding
protein binding
transcription factor binding
ligand-dependent nuclear receptor binding
ligand-dependent nuclear receptor transcription coactivator activity
chromatin DNA binding
ubiquitin protein ligase binding
sequence-specific DNA binding