Mm01209749_s1

• Gene Symbol: Sox1
• Gene Name: SRY (sex determining region Y)-box 1
• Gene Aliases: BB176347, Sox-1
• Chromosome Location: Chr.8: 12395519 - 12399555 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sox1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_009233.3	NP_033259.2	1	1728		147
GenBank mRNA	AB108672.1	-	1	925		147

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0800000105.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Detect Genomic DNA, Mus musculus, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sox1

Gene Ontology Categories:

Process(es)

neuron migration
lens morphogenesis in camera-type eye
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription by RNA polymerase II
ventral spinal cord interneuron specification
forebrain neuron differentiation
forebrain neuron development
forebrain development
positive regulation of transcription by RNA polymerase II

Function(s)

RNA polymerase II cis-regulatory region sequence-specific DNA binding
core promoter sequence-specific DNA binding
DNA binding
sequence-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0800000863.mm.1	TC0800000105.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800000863.mm.1	NM_009233.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800000863.mm.1	NM_009233.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800000864.mm.1	TC0800000105.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800000864.mm.1	NM_009233.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800000864.mm.1	NM_009233.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800000862.mm.1	TC0800000105.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800000862.mm.1	NM_009233.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800000862.mm.1	NM_009233.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800000865.mm.1	TC0800000105.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800000865.mm.1	NM_009233.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800000865.mm.1	NM_009233.3	Refseq