C130083M11Rik
Genomic Map
Back To TopAssay Details
| Gene Symbol: C130083M11Rik | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_040717.1 | 6 - 7 | 653 | 89 | ||
| GenBank mRNA | AK081871.1 | - | 6 - 7 | 654 | 89 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | RIKEN cDNA 9230114K14 gene | 9230114K14Rik | -3.7kb | Anti-sense | Chr. 5 - 52190681 - 52197984 on NCBI Build GRCm38 | |
| Downstream |
superoxide dismutase 3, extracellular |
Sod3 |
AI314465, EC-SOD |
161.7kb | Anti-sense | Chr. 5 - 52363804 - 52369738 on NCBI Build GRCm38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0500002408.mm.1Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Mus musculus
1700
Probe spans exons
|
MicroArray Probes:
Agilent
Affymetrix
ABI
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2320433 | AK081871.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P908053 | AK081871.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P124911 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04280536 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693484 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693521 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04537480 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04829791 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693482 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693436 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693433 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04829790 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693439 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693490 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04437192 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693456 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693514 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04280200 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693508 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693520 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693527 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693505 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693535 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693501 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04211620 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693485 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693530 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693496 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693488 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693499 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693451 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04211624 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693510 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693428 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693495 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693522 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04255120 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04209864 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04214385 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693517 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04437191 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693458 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693528 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693537 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04598583 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693480 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04829788 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693434 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693429 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693426 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04211622 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693533 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04829789 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693441 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693518 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693532 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693446 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P23693450 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Clariom S Array | PSR0500021725.mm.1 | TC0500002408.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500021725.mm.1 | NR_040717.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021725.mm.1 | NR_040717.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021731.mm.1 | TC0500002408.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500021731.mm.1 | NR_040717.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021731.mm.1 | NR_040717.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021729.mm.1 | TC0500002408.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500021729.mm.1 | NR_040717.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021729.mm.1 | NR_040717.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021724.mm.1 | TC0500002408.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500021724.mm.1 | NR_040717.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021724.mm.1 | NR_040717.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021727.mm.1 | TC0500002408.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500021727.mm.1 | NR_040717.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021727.mm.1 | NR_040717.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021726.mm.1 | TC0500002408.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500021726.mm.1 | NR_040717.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021726.mm.1 | NR_040717.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021728.mm.1 | TC0500002408.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500021728.mm.1 | NR_040717.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021728.mm.1 | NR_040717.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021730.mm.1 | TC0500002408.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500021730.mm.1 | NR_040717.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500021730.mm.1 | NR_040717.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 780330 | - | - |
Back To Top