Mm01220388_m1

• Gene Symbol: Prpf6
• Gene Name: PRP6 pre-mRNA splicing factor 6 homolog (yeast)
• Gene Aliases: 1190003A07Rik, 2610031L17Rik, ANT-1, U5-102K
• Chromosome Location: Chr.2: 181601319 - 181655661 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Prpf6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133701.2	NP_598462.1	10 - 11	1449		92
GenBank mRNA	AK081998.1	-	10 - 11	1384		92
	AK145461.1	-	10 - 11	1452		92
	AK166890.1	-	10 - 11	1401		92
	BC014869.1	-	10 - 11	1376	3602158	92
	BC023691.1	-	10 - 11	1378	5344332	92
	BC025030.1	-	10 - 11	1395	4947416	92

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200002830.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Prpf6

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

spliceosomal tri-snRNP complex assembly
mRNA splicing, via spliceosome
RNA processing
mRNA processing
RNA localization
RNA splicing
positive regulation of transcription from RNA polymerase II promoter

Function(s)

transcription coactivator activity
RNA binding
ribonucleoprotein complex binding
poly(A) RNA binding
androgen receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200023398.mm.1	NM_133701.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200023398.mm.1	NM_133701.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0200023398.mm.1	TC0200002830.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200023400.mm.1	TC0200002830.mm.1	MTA TC