Mm01220390_g1

• Gene Symbol: Prpf6
• Gene Name: PRP6 pre-mRNA splicing factor 6 homolog (yeast)
• Gene Aliases: 1190003A07Rik, 2610031L17Rik, ANT-1, U5-102K
• Chromosome Location: Chr.2: 181601319 - 181655661 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Prpf6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133701.2	NP_598462.1	15 - 16	2173		112
GenBank mRNA	AK081998.1	-	15 - 16	2108		112
	AK145461.1	-	15 - 16	2176		112
	AK166890.1	-	15 - 16	2125		112
	BC005801.1	-	5 - 6	689		112
	BC014869.1	-	15 - 16	2100	3602158	112
	BC023691.1	-	15 - 16	2102	5344332	112

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200002830.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Prpf6

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

spliceosomal tri-snRNP complex assembly
mRNA splicing, via spliceosome
RNA processing
mRNA processing
RNA localization
RNA splicing
positive regulation of transcription from RNA polymerase II promoter

Function(s)

transcription coactivator activity
RNA binding
ribonucleoprotein complex binding
poly(A) RNA binding
androgen receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200023405.mm.1	NM_133701.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200023405.mm.1	NM_133701.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0200023405.mm.1	TC0200002830.mm.1	MTA TC