Mm01220391_g1

• Gene Symbol: Prpf6
• Gene Name: PRP6 pre-mRNA splicing factor 6 homolog (yeast)
• Gene Aliases: 1190003A07Rik, 2610031L17Rik, ANT-1, U5-102K
• Chromosome Location: Chr.2: 181601319 - 181655661 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Prpf6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133701.2	NP_598462.1	16 - 17	2344		74
GenBank mRNA	AK004462.1	-	1 - 2	44		74
	AK081998.1	-	16 - 17	2279		74
	AK145461.1	-	16 - 17	2347		74
	AK166890.1	-	16 - 17	2296		74
	BC005801.1	-	6 - 7	860		74
	BC014869.1	-	16 - 17	2271	3602158	74
	BC023691.1	-	16 - 17	2273	5344332	74

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200002830.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Prpf6

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

spliceosomal tri-snRNP complex assembly
mRNA splicing, via spliceosome
RNA processing
mRNA processing
RNA localization
RNA splicing
positive regulation of transcription from RNA polymerase II promoter

Function(s)

transcription coactivator activity
RNA binding
ribonucleoprotein complex binding
poly(A) RNA binding
androgen receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200023406.mm.1	NM_133701.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200023406.mm.1	NM_133701.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0200023406.mm.1	TC0200002830.mm.1	MTA TC