Mm01220863_m1

• Gene Symbol: Sdcbp
• Gene Name: syndecan binding protein
• Gene Aliases: MDA-9, Sycl, syntenin-1
• Chromosome Location: Chr.4: 6365680 - 6396122 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sdcbp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001098227.1	NP_001091697.1	2 - 3	147		132
	NM_016807.2	NP_058087.2	2 - 3	147		132
GenBank mRNA	AF077527.1	-	2 - 3	106		132
	AK014678.1	-		121		132
	AK028429.1	-	2 - 3	120		132
	AK033412.1	-	2 - 3	145		132
	AK146085.1	-	2 - 3	119		132
	AK150278.1	-	2 - 3	112		132
	AK150321.1	-	2 - 3	115		132
	AK150544.1	-	2 - 3	119		132
	AK150623.1	-	2 - 3	123		132
	AK150661.1	-	2 - 3	115		132
	AK150707.1	-	2 - 3	118		132
	AK150721.1	-	2 - 3	127		132
	AK150736.1	-	2 - 3	115		132
	AK150801.1	-	2 - 3	117		132
	AK150996.1	-	2 - 3	119		132
	AK151050.1	-	2 - 3	119		132
	AK152001.1	-	2 - 3	118		132
	AK152017.1	-	2 - 3	119		132
	AK152080.1	-	2 - 3	126		132
	AK152109.1	-	2 - 3	119		132
	AK152434.1	-	2 - 3	119		132
	AK152552.1	-	2 - 3	123		132
	AK152577.1	-	2 - 3	118		132
	AK152855.1	-	2 - 3	119		132
	AK153042.1	-	2 - 3	119		132
	AK153112.1	-	2 - 3	123		132
	AK159124.1	-	2 - 3	115		132
	AK159538.1	-	2 - 3	120		132
	AK159677.1	-	2 - 3	126		132
	AK165657.1	-	2 - 3	117		132
	AK167513.1	-	2 - 3	115		132
	AK168004.1	-	2 - 3	122		132
	AK168777.1	-	2 - 3	115		132
	AK169219.1	-	2 - 3	124		132
	AK169415.1	-	2 - 3	153		132
	AK169687.1	-	2 - 3	119		132
	AK171162.1	-	2 - 3	119		132
	BC019400.1	-	2 - 3	110	4017442	131
	BY779386.1	-	2 - 3	148		132

More Information

Additional Information:

This assay is in the 5'UTR region of the AF077527.1, AK028429.1, AK033412.1, AK146085.1, AK150278.1, AK150321.1, AK150544.1, AK150623.1, AK150661.1, AK150707.1, AK150721.1, AK150736.1, AK150801.1, AK150996.1, AK151050.1, AK152001.1, AK152017.1, AK152109.1, AK152434.1, AK152552.1, AK152577.1, AK152855.1, AK153042.1, AK153112.1, AK159538.1, AK159677.1, AK165657.1, AK167513.1, AK168004.1, AK168777.1, AK169219.1, AK169415.1, AK169687.1, AK171162.1, BC019400.1, NM_001098227.1, NM_016807.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sdcbp

Panther Classification:

Molecular Function -

membrane trafficking regulatory protein

Gene Ontology Categories:

Process(es)

Ras protein signal transduction
positive regulation of phosphorylation
positive regulation of exosomal secretion
positive regulation of extracellular exosome assembly

Function(s)

glycoprotein binding
frizzled binding
interleukin-5 receptor binding
protein binding
protein C-terminus binding
growth factor binding
neurexin family protein binding
identical protein binding
protein homodimerization activity
syndecan binding
ephrin receptor binding
protein heterodimerization activity
protein N-terminus binding
cell adhesion molecule binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0400000264.mm.1	NM_001098227.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400000264.mm.1	NM_001098227.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400000264.mm.1	NM_016807.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400000264.mm.1	NM_016807.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0400000264.mm.1	TC0400000039.mm.1	MTA TC