Mm01220864_m1

• Gene Symbol: Sdcbp
• Gene Name: syndecan binding protein
• Gene Aliases: MDA-9, Sycl, syntenin-1
• Chromosome Location: Chr.4: 6365680 - 6396122 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sdcbp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001098227.1	NP_001091697.1	3 - 4	230		88
	NM_016807.2	NP_058087.2	3 - 4	230		88
GenBank mRNA	AF003693.1	-	3 - 4	222		88
	AF077527.1	-	3 - 4	189		88
	AK014678.1	-		204		88
	AK028429.1	-	3 - 4	203		88
	AK033412.1	-	3 - 4	228		88
	AK146085.1	-	3 - 4	202		88
	AK150278.1	-	3 - 4	195		88
	AK150321.1	-	3 - 4	198		88
	AK150544.1	-	3 - 4	202		88
	AK150623.1	-	3 - 4	206		88
	AK150661.1	-	3 - 4	198		88
	AK150707.1	-	3 - 4	201		88
	AK150721.1	-	3 - 4	210		88
	AK150736.1	-	3 - 4	198		88
	AK150801.1	-	3 - 4	200		88
	AK150996.1	-	3 - 4	202		88
	AK151050.1	-	3 - 4	202		88
	AK152001.1	-	3 - 4	201		88
	AK152017.1	-	3 - 4	202		88
	AK152080.1	-	3 - 4	209		88
	AK152109.1	-	3 - 4	202		88
	AK152434.1	-	3 - 4	202		88
	AK152552.1	-	3 - 4	206		88
	AK152577.1	-	3 - 4	201		88
	AK152855.1	-	3 - 4	202		88
	AK153042.1	-	3 - 4	202		88
	AK153112.1	-	3 - 4	206		88
	AK159124.1	-	3 - 4	198		88
	AK159323.1	-	3 - 4	176		88
	AK159538.1	-	3 - 4	203		88
	AK159677.1	-	3 - 4	209		88
	AK165657.1	-	3 - 4	200		88
	AK167513.1	-	3 - 4	198		88
	AK168004.1	-	3 - 4	205		88
	AK168777.1	-	3 - 4	198		88
	AK169219.1	-	3 - 4	207		88
	AK169415.1	-	3 - 4	236		88
	AK169687.1	-	3 - 4	202		88
	AK171162.1	-	3 - 4	202		88
	BC019400.1	-	3 - 4	193	4017442	88
	BY779386.1	-	3 - 4	231		88

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400000039.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sdcbp

Panther Classification:

Molecular Function -

membrane trafficking regulatory protein

Gene Ontology Categories:

Process(es)

Ras protein signal transduction
positive regulation of phosphorylation
positive regulation of exosomal secretion
positive regulation of extracellular exosome assembly

Function(s)

glycoprotein binding
frizzled binding
interleukin-5 receptor binding
protein binding
protein C-terminus binding
growth factor binding
neurexin family protein binding
identical protein binding
protein homodimerization activity
syndecan binding
ephrin receptor binding
protein heterodimerization activity
protein N-terminus binding
cell adhesion molecule binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0400000265.mm.1	NM_001098227.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400000265.mm.1	NM_001098227.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400000265.mm.1	NM_016807.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400000265.mm.1	NM_016807.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0400000265.mm.1	TC0400000039.mm.1	MTA TC