Mm01228156_m1

• Gene Symbol: Sox17
• Gene Name: SRY (sex determining region Y)-box 17
• Gene Aliases: -
• Chromosome Location: Chr.1: 4490928 - 4497388 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sox17
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001289464.1	NP_001276393.1	1 - 2	1068		121
	NM_001289467.1	NP_001276396.1	1 - 2	1068		121
GenBank mRNA	D49473.1	-	1 - 2	477		121
	D49474.1	-	1 - 2	77		121

More Information

Additional Information:

This assay is in the 5'UTR region of the D49473.1, D49474.1, NM_001289464.1, NM_001289467.1 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Mus musculus, Probe spans exons

Panther Classification:

Molecular Function -

HMG box transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
angiogenesis
vasculogenesis
endoderm formation
inner cell mass cellular morphogenesis
heart looping
cardiogenic plate morphogenesis
embryonic heart tube morphogenesis
outflow tract morphogenesis
negative regulation of Wnt signaling pathway involved in heart development
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
spermatogenesis
gastrulation
endoderm development
endodermal cell fate determination
positive regulation of gene expression
Wnt signaling pathway
rostrocaudal neural tube patterning
signal transduction involved in regulation of gene expression
negative regulation of Wnt signaling pathway
negative regulation of cell growth
protein destabilization
embryonic heart tube development
cell migration involved in gastrulation
regulation of mesodermal cell fate specification
negative regulation of mesodermal cell fate specification
mRNA transcription from RNA polymerase II promoter
regulation of cell differentiation
positive regulation of cell differentiation
positive regulation of protein catabolic process
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of embryonic development
embryonic organ development
embryonic foregut morphogenesis
positive regulation of skeletal muscle tissue development
stem cell differentiation
stem cell fate specification
protein stabilization
canonical Wnt signaling pathway
endocardium formation
regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification
cardiac cell fate determination
endocardial cell differentiation
common bile duct development
gall bladder development
endodermal digestive tract morphogenesis
renal system development
regulation of stem cell proliferation
negative regulation of canonical Wnt signaling pathway
regulation of stem cell division
regulation of cardiac cell fate specification

Function(s)

RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
transcription coactivator activity
protein binding
beta-catenin binding
transcription factor binding
sequence-specific DNA binding
transcription regulatory region DNA binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100015739.mm.1	NM_001289464.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015739.mm.1	NM_001289465.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015739.mm.1	NM_001289466.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015739.mm.1	NM_001289467.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015739.mm.1	NM_011441.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015739.mm.1	TC0100001905.mm.1	MTA TC