Mm01230649_g1

• Gene Symbol: Sema3f
• Gene Name: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
• Gene Aliases: Sema4, Semak
• Chromosome Location: Chr.9: 107681499 - 107710475 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sema3f
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_011349.3	NP_035479.2	4 - 5	542		59
GenBank mRNA	AF036162.1	-	2 - 3	200		59
	AF080090.1	-	3 - 4	355		59
	AF080091.1	-	3 - 4	341		59
	AK053632.1	-	4 - 5	543		59
	AK140340.1	-	4 - 5	994		59
	BC010976.1	-	4 - 5	463	4219060	59

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AK172610.1	-		935		Chr. - - [-] on Build	59

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0900003042.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sema3f

Panther Classification:

Molecular Function -

membrane-bound signaling molecule, intercellular signal molecule

Gene Ontology Categories:

Process(es)

neural crest cell migration
axon guidance
facial nerve structural organization
trigeminal nerve structural organization
nerve development
branchiomotor neuron axon guidance
ventral trunk neural crest cell migration
negative regulation of axon extension involved in axon guidance
axon extension involved in axon guidance
negative chemotaxis
sympathetic ganglion development
sympathetic neuron projection extension
sympathetic neuron projection guidance
neural crest cell migration involved in autonomic nervous system development
semaphorin-plexin signaling pathway involved in neuron projection guidance
semaphorin-plexin signaling pathway involved in axon guidance

Function(s)

chemorepellent activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0900025449.mm.1	NM_011349.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900025449.mm.1	NM_011349.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0900025449.mm.1	TC0900003042.mm.1	MTA TC