Mm01232733_m1

• Gene Symbol: Ftx
• Gene Name: Ftx transcript, Xist regulator (non-protein coding)
• Gene Aliases: B230206F22Rik, BB219131, NCRNA00182, Thcytx
• Chromosome Location: Chr.X: 103560910 - 103623754 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ftx
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_028380.1		1 - 2	204		74
	NR_028381.1		1 - 2	204		74
GenBank mRNA	AK035525.1	-	1 - 2	206		74
	BC076616.1	-	1 - 2	113		74

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BB628053.1	-	1 - 2	206		Chr. X - 103609304 - 103623756 [-] on Build GRCm38	74
GenBankmRNA	BB619145.1	-	1 - 2	146		Chr. X - 103607553 - 103623694 [-] on Build GRCm38	74
GenBankmRNA	CJ045781.1	-	1 - 2	184		Chr. X - 103613031 - 103623733 [-] on Build GRCm38	74
GenBankmRNA	CN525891.1	-	1 - 2	113		Chr. X - 103607604 - 103623663 [-] on Build GRCm38	74

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 374b	Mir374b	Mir374, Mirn374, mir-374b, mmu-mir-374, mmu-mir-374b	-41.9kb	Sense	Chr. X - 103573060 - 103573154 on NCBI Build GRCm38
Downstream	zinc finger, CCHC domain containing 13	Zcchc13	4930513O09Rik, Cnbp2	6.9kb	Anti-sense	Chr. X - 103630586 - 103631664 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00002778.mm.1

• Set Membership: Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, Probe spans exons

Gene Ontology Categories:

Process(es)

chromatin organization
regulation of gene expression
regulation of DNA methylation
regulation of dosage compensation by inactivation of X chromosome

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00017565.mm.1	TC0X00002778.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00017565.mm.1	NR_028380.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017565.mm.1	NR_028380.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017565.mm.1	NR_028381.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017565.mm.1	NR_028381.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017563.mm.1	TC0X00002778.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00017563.mm.1	NR_028380.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017563.mm.1	NR_028380.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017563.mm.1	NR_028381.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017563.mm.1	NR_028381.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017564.mm.1	TC0X00002778.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00017564.mm.1	NR_028380.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017564.mm.1	NR_028380.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017564.mm.1	NR_028381.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017564.mm.1	NR_028381.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017558.mm.1	TC0X00002778.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00017558.mm.1	NR_028380.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017558.mm.1	NR_028380.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017558.mm.1	NR_028381.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017558.mm.1	NR_028381.1	Refseq