Mm01240659_m1

• Gene Symbol: Rfx4
• Gene Name: regulatory factor X, 4 (influences HLA class II expression)
• Gene Aliases: 4933412G19Rik, NYD-sp10
• Chromosome Location: Chr.10: 84756048 - 84906538 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rfx4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001024918.1	NP_001020089.1	11 - 12	1567		111
	NM_027689.3	NP_081965.2	7 - 8	899		111
GenBank mRNA	AB086957.1	-	11 - 12	1421		111
	AB089184.1	-	7 - 8	900		111
	AK016791.1	-	7 - 8	900		111
	AK034131.1	-	11 - 12	1554		111
	AK132673.1	-	8 - 9	962		111
	AY102010.2	-	11 - 12	1450		111
	AY342003.1	-	11 - 12	1432		111
	BC138719.1	-	7 - 8	887	8861741	111
	BC138720.1	-	7 - 8	887	8861742	111

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1000001024.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rfx4

Panther Classification:

Molecular Function -

winged helix/forkhead transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
dorsal spinal cord development
telencephalon development
cerebellar cortex morphogenesis
negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning
forebrain development
midbrain development
cilium assembly
positive regulation of transcription from RNA polymerase II promoter
regulation of protein processing

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1000007732.mm.1	NM_001024918.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007732.mm.1	NM_001024918.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007732.mm.1	NM_027689.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007732.mm.1	NM_027689.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007732.mm.1	TC1000001024.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1000007733.mm.1	NM_001024918.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007733.mm.1	NM_001024918.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007733.mm.1	NM_027689.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007733.mm.1	NM_027689.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007733.mm.1	TC1000001024.mm.1	MTA TC