Mm01251190_m1 Best Coverage

• Gene Symbol: Alkbh8
• Gene Name: alkB, alkylation repair homolog 8 (E. coli)
• Gene Aliases: 4930562C03Rik, 8030431D03Rik, 9430088N01Rik, Abh8
• Chromosome Location: Chr.9: 3335231 - 3387313 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Alkbh8
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_026303.1	NP_080579.1	9 - 10	1055		74
GenBank mRNA	AK033352.1	-	9 - 10	1293		74
	AK041810.1	-	9 - 10	1146		74
	AK054267.1	-	10 - 11	1455		74
	AK081459.1	-	9 - 10	1306		74
	AK133489.1	-	9 - 10	1151		74
	AK160783.1	-	8 - 9	1042		74
	BC050863.1	-	9 - 10	1055	6329366	74

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0900000013.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Alkbh8

Gene Ontology Categories:

Process(es)

tRNA wobble uridine modification
cellular response to DNA damage stimulus
metabolic process
tRNA methylation
methylation
oxidation-reduction process

Function(s)

tRNA binding
nucleotide binding
rRNA (adenine-N6,N6-)-dimethyltransferase activity
sulfonate dioxygenase activity
nucleic acid binding
RNA binding
catalytic activity
protein C-terminal carboxyl O-methyltransferase activity
tRNA (guanine-N2-)-methyltransferase activity
iron ion binding
methyltransferase activity
C-methyltransferase activity
N-methyltransferase activity
O-methyltransferase activity
S-methyltransferase activity
RNA methyltransferase activity
mRNA methyltransferase activity
tRNA methyltransferase activity
zinc ion binding
protein methyltransferase activity
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
rRNA methyltransferase activity
rRNA (uridine-2'-O-)-methyltransferase activity
rRNA (adenine-N6-)-methyltransferase activity
DNA-methyltransferase activity
tRNA (guanine-N1-)-methyltransferase activity
rRNA (cytosine-C5-)-methyltransferase activity
selenocysteine methyltransferase activity
arginine N-methyltransferase activity
protein-arginine N-methyltransferase activity
lysine N-methyltransferase activity
protein-lysine N-methyltransferase activity
tRNA (uracil) methyltransferase activity
tRNA (guanine) methyltransferase activity
tRNA (adenine) methyltransferase activity
tRNA (cytosine) methyltransferase activity
tRNA (cytosine-5-)-methyltransferase activity
tRNA (adenine-N1-)-methyltransferase activity
rRNA (adenine) methyltransferase activity
rRNA (cytosine) methyltransferase activity
rRNA (guanine) methyltransferase activity
rRNA (uridine) methyltransferase activity
oxidoreductase activity
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
transferase activity
protein C-terminal leucine carboxyl O-methyltransferase activity
2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
1-phenanthrol methyltransferase activity
protein-arginine N5-methyltransferase activity
procollagen-proline dioxygenase activity
methylarsonite methyltransferase activity
dimethylarsinite methyltransferase activity
hypophosphite dioxygenase activity
4,5-dihydroxybenzo(a)pyrene methyltransferase activity
1-hydroxypyrene methyltransferase activity
1-hydroxy-6-methoxypyrene methyltransferase activity
DNA-N1-methyladenine dioxygenase activity
demethylmenaquinone methyltransferase activity
cobalt-precorrin-6B C5-methyltransferase activity
cobalt-precorrin-7 C15-methyltransferase activity
cobalt-precorrin-5B C1-methyltransferase activity
cobalt-precorrin-3 C17-methyltransferase activity
dimethylamine methyltransferase activity
hydroxyneurosporene-O-methyltransferase activity
tRNA (adenine-57, 58-N(1)-) methyltransferase activity
methylamine-specific methylcobalamin:coenzyme M methyltransferase activity
trimethylamine methyltransferase activity
methanol-specific methylcobalamin:coenzyme M methyltransferase activity
monomethylamine methyltransferase activity
metal ion binding
P-methyltransferase activity
Se-methyltransferase activity
2-phytyl-1,4-naphthoquinone methyltransferase activity
C-19 gibberellin 2-beta-dioxygenase activity
C-20 gibberellin 2-beta-dioxygenase activity
tRNA (uracil-2'-O-)-methyltransferase activity
tRNA (cytosine-2'-O-)-methyltransferase activity
phosphomethylethanolamine N-methyltransferase activity
tRNA (cytosine-3-)-methyltransferase activity
rRNA (cytosine-2'-O-)-methyltransferase activity
rRNA (cytosine-N4-)-methyltransferase activity
trihydroxyferuloyl spermidine O-methyltransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0900000122.mm.1	NM_026303.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900000122.mm.1	NM_026303.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900000122.mm.1	TC0900000013.mm.1	MTA TC