Mm01252782_m1

• Gene Symbol: Smyd4
• Gene Name: SET and MYND domain containing 4
• Gene Aliases: G430029E23Rik
• Chromosome Location: Chr.11: 75348433 - 75405707 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Smyd4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001102611.1	NP_001096081.1	2 - 3	458		98
GenBank mRNA	AK030380.1	-	2 - 3	296		98
	AK089959.1	-	2 - 3	394		98
	AK141484.1	-	2 - 3	371		98
	AK166057.1	-	2 - 3	396		98
	BC049810.1	-	2 - 3	320		98
	CN693729.1	-	2 - 3	458		98

More Information

Additional Information:

This assay is in the 5'UTR region of the AK030380.1 transcripts.

• Set Membership: Amplicon length between 86 and 100, Mammalian Gene Collection, Mus musculus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

biological_process
methylation

Function(s)

rRNA (adenine-N6,N6-)-dimethyltransferase activity
molecular_function
protein C-terminal carboxyl O-methyltransferase activity
tRNA (guanine-N2-)-methyltransferase activity
methyltransferase activity
C-methyltransferase activity
N-methyltransferase activity
O-methyltransferase activity
S-methyltransferase activity
RNA methyltransferase activity
mRNA methyltransferase activity
tRNA methyltransferase activity
protein methyltransferase activity
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
rRNA methyltransferase activity
rRNA (uridine-2'-O-)-methyltransferase activity
rRNA (adenine-N6-)-methyltransferase activity
DNA-methyltransferase activity
tRNA (guanine-N1-)-methyltransferase activity
rRNA (cytosine-C5-)-methyltransferase activity
selenocysteine methyltransferase activity
arginine N-methyltransferase activity
protein-arginine N-methyltransferase activity
lysine N-methyltransferase activity
protein-lysine N-methyltransferase activity
tRNA (uracil) methyltransferase activity
tRNA (guanine) methyltransferase activity
tRNA (adenine) methyltransferase activity
tRNA (cytosine) methyltransferase activity
tRNA (cytosine-5-)-methyltransferase activity
tRNA (adenine-N1-)-methyltransferase activity
rRNA (adenine) methyltransferase activity
rRNA (cytosine) methyltransferase activity
rRNA (guanine) methyltransferase activity
rRNA (uridine) methyltransferase activity
transferase activity
protein C-terminal leucine carboxyl O-methyltransferase activity
1-phenanthrol methyltransferase activity
protein-arginine N5-methyltransferase activity
methylarsonite methyltransferase activity
dimethylarsinite methyltransferase activity
4,5-dihydroxybenzo(a)pyrene methyltransferase activity
1-hydroxypyrene methyltransferase activity
1-hydroxy-6-methoxypyrene methyltransferase activity
demethylmenaquinone methyltransferase activity
cobalt-precorrin-6B C5-methyltransferase activity
cobalt-precorrin-7 C15-methyltransferase activity
cobalt-precorrin-5B C1-methyltransferase activity
cobalt-precorrin-3 C17-methyltransferase activity
dimethylamine methyltransferase activity
hydroxyneurosporene-O-methyltransferase activity
tRNA (adenine-57, 58-N(1)-) methyltransferase activity
methylamine-specific methylcobalamin:coenzyme M methyltransferase activity
trimethylamine methyltransferase activity
methanol-specific methylcobalamin:coenzyme M methyltransferase activity
monomethylamine methyltransferase activity
metal ion binding
P-methyltransferase activity
Se-methyltransferase activity
2-phytyl-1,4-naphthoquinone methyltransferase activity
tRNA (uracil-2'-O-)-methyltransferase activity
tRNA (cytosine-2'-O-)-methyltransferase activity
phosphomethylethanolamine N-methyltransferase activity
tRNA (cytosine-3-)-methyltransferase activity
rRNA (cytosine-2'-O-)-methyltransferase activity
rRNA (cytosine-N4-)-methyltransferase activity
trihydroxyferuloyl spermidine O-methyltransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1100009592.mm.1	NM_001102611.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100009592.mm.1	NM_001102611.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100009592.mm.1	TC1100001066.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100009591.mm.1	NM_001102611.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100009591.mm.1	NM_001102611.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100009591.mm.1	TC1100001066.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100009590.mm.1	NM_001102611.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100009590.mm.1	NM_001102611.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100009590.mm.1	TC1100001066.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100009597.mm.1	NM_001102611.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100009597.mm.1	NM_001102611.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100009597.mm.1	TC1100001066.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100009593.mm.1	NM_001102611.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100009593.mm.1	NM_001102611.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100009593.mm.1	TC1100001066.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	531813	-	-