Mm01253375_m1

• Gene Symbol: Pafah1b1
• Gene Name: platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
• Gene Aliases: LIS-1, Lis1, MMS10-U, Mdsh, Ms10u, Pafaha
• Chromosome Location: Chr.11: 74673949 - 74724384 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pafah1b1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_013625.4	NP_038653.1	1 - 2	387		82
GenBank mRNA	AK144908.1	-	1 - 2	376		82
	AK147207.1	-	1 - 2	325		82
	AK147229.1	-	1 - 2	338		82
	AK147237.1	-	1 - 2	379		82
	AK147309.1	-	1 - 2	322		82
	AK147515.1	-	1 - 2	374		82
	AK147533.1	-	1 - 2	354		82
	AK164008.1	-	1 - 2	58		82
	AK167448.1	-	1 - 2	354		82
	AK167824.1	-	1 - 2	379		82
	AK168960.1	-	1 - 2	342		82
	BC014831.1	-	1 - 2	326	4507474	82
	BC026141.1	-	1 - 2	351	4017963	82
	BC046989.1	-	1 - 2	360		82
	BC099462.1	-	1 - 2	326		82
	BQ895724.1	-	1 - 2	387		82
	L25108.1	-	1 - 2	287		82
	U95116.1	-	1 - 2	682		82

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1100003198.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK144908.1, AK147207.1, AK147237.1, AK147309.1, AK147515.1, AK147533.1, AK164008.1, AK167448.1, AK167824.1, AK168960.1, BC014831.1, BC026141.1, NM_013625.4, U95116.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pafah1b1

Gene Ontology Categories:

Process(es)

establishment of mitotic spindle orientation
microtubule cytoskeleton organization
mitotic cell cycle
ameboidal-type cell migration
acrosome assembly
neuron migration
positive regulation of cytokine-mediated signaling pathway
lipid metabolic process
transport
microtubule-based process
cell cycle
nuclear migration
chemical synaptic transmission
multicellular organism development
nervous system development
neuroblast proliferation
learning or memory
retrograde axonal transport
adult locomotory behavior
protein secretion
negative regulation of neuron projection development
lipid catabolic process
cell migration
stem cell division
transmission of nerve impulse
corpus callosum morphogenesis
hippocampus development
layer formation in cerebral cortex
cerebral cortex neuron differentiation
cerebral cortex development
actin cytoskeleton organization
cell differentiation
microtubule organizing center organization
osteoclast development
regulation of GTPase activity
positive regulation of axon extension
positive regulation of mitotic cell cycle
negative regulation of JNK cascade
vesicle transport along microtubule
brain morphogenesis
neuromuscular process controlling balance
nuclear membrane disassembly
cell division
establishment of centrosome localization

Function(s)

protein binding
microtubule binding
protein homodimerization activity
protein-containing complex binding
dynein intermediate chain binding
phosphoprotein binding
dynein complex binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1100029467.mm.1	TC1100003198.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100029467.mm.1	NM_013625.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029467.mm.1	NM_013625.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029467.mm.1	NR_037610.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029467.mm.1	NR_037610.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029468.mm.1	TC1100003198.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100029468.mm.1	NM_013625.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029468.mm.1	NM_013625.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029468.mm.1	NR_037610.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029468.mm.1	NR_037610.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029472.mm.1	TC1100003198.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100029472.mm.1	NM_013625.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029472.mm.1	NM_013625.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029469.mm.1	TC1100003198.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100029469.mm.1	NM_013625.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029469.mm.1	NM_013625.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029469.mm.1	NR_037610.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029469.mm.1	NR_037610.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029476.mm.1	TC1100003198.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100029476.mm.1	NM_013625.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100029476.mm.1	NM_013625.4	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	486220	-	-