Mm01256322_m1 Best Coverage

• Gene Symbol: Ercc5
• Gene Name: excision repair cross-complementing rodent repair deficiency, complementation group 5
• Gene Aliases: Xpg
• Chromosome Location: Chr.1: 44147578 - 44181260 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ercc5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_011729.2	NP_035859.2	11 - 12	2848		126
GenBank mRNA	AK137563.1	-	12 - 13	2680		126
	AK140825.1	-	11 - 12	2677		126
	AK160581.1	-	5 - 6	1722		126
	AK160645.1	-	9 - 10	2220		126
	AK164205.1	-	11 - 12	2666		126
	BC033413.1	-	11 - 12	2568		126
	BC053034.1	-	11 - 12	2658		126
	BC060659.1	-	10 - 11	2979		126
	BC092235.1	-	11 - 12	2639		126
	BC141070.1	-	11 - 12	2678	9055682	126
	D16306.1	-	11 - 12	2543		126
	U40796.1	-	11 - 12	2744		126

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100000334.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ercc5

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)

DNA repair
transcription-coupled nucleotide-excision repair
nucleotide-excision repair
nucleotide-excision repair, DNA incision, 3'-to lesion
cellular response to DNA damage stimulus
determination of adult lifespan
response to UV
UV protection
response to UV-C
multicellular organism growth
negative regulation of apoptotic process

Function(s)

bubble DNA binding
DNA binding
double-stranded DNA binding
single-stranded DNA binding
catalytic activity
nuclease activity
endonuclease activity
endodeoxyribonuclease activity
hydrolase activity
hydrolase activity, acting on ester bonds
phosphoric ester hydrolase activity
protein homodimerization activity
T/G mismatch-specific endonuclease activity
retroviral 3' processing activity
metal ion binding
protein N-terminus binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100002514.mm.1	NM_011729.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100002514.mm.1	NM_011729.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0100002514.mm.1	TC0100000334.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	693855	-	-