Mm01258397_m1

• Gene Symbol: Hdac3
• Gene Name: histone deacetylase 3
• Gene Aliases: AW537363
• Chromosome Location: Chr.18: 37936971 - 37955000 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hdac3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_010411.2	NP_034541.2	10 - 11	904		94
GenBank mRNA	AF074881.1	-	10 - 11	851		94
	AF074882.1	-	4 - 5	278		94
	AF098295.1	-	10 - 11	829		94
	AF125536.1	-	10 - 11	836		94
	AK037478.1	-		379		94
	AK145158.1	-	10 - 11	870		94
	AK206656.1	-	3 - 4	191		94
	BC139300.1	-	10 - 11	932	8862322	94
	BC139301.1	-	10 - 11	932	8862323	94
	JN651901.1	-	5 - 6	303		94
	JN651902.1	-	4 - 5	261		94
	JN651903.1	-	4 - 5	261		94

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1800001220.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hdac3

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
positive regulation of protein phosphorylation
transcription, DNA-templated
regulation of transcription, DNA-templated
protein deacetylation
regulation of mitotic cell cycle
chromatin modification
histone deacetylation
regulation of protein stability
positive regulation of TOR signaling
negative regulation of interleukin-1 production
negative regulation of tumor necrosis factor production
circadian regulation of gene expression
regulation of multicellular organism growth
positive regulation of transcription factor import into nucleus
negative regulation of sequence-specific DNA binding transcription factor activity
positive regulation of neuron apoptotic process
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
negative regulation of JNK cascade
negative regulation of protein export from nucleus
spindle assembly
cellular response to fluid shear stress
positive regulation of type B pancreatic cell apoptotic process
negative regulation of cardiac muscle cell differentiation

Function(s)

DNA binding
chromatin binding
transcription corepressor activity
histone deacetylase activity
protein binding
transcription factor binding
hydrolase activity
enzyme binding
cyclin binding
histone deacetylase activity (H3-K14 specific)
chromatin DNA binding
NAD-dependent histone deacetylase activity (H3-K14 specific)
histone deacetylase activity (H3-K9 specific)
protein deacetylase activity
histone deacetylase activity (H4-K16 specific)
histone deacetylase binding
NAD-dependent histone deacetylase activity (H3-K9 specific)
NAD-dependent histone deacetylase activity (H4-K16 specific)
GTPase binding
NF-kappaB binding
NAD-dependent histone deacetylase activity (H3-K18 specific)

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1800008984.mm.1	NM_010411.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800008984.mm.1	NM_010411.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1800008984.mm.1	TC1800001220.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1800008983.mm.1	NM_010411.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800008983.mm.1	NM_010411.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1800008983.mm.1	TC1800001220.mm.1	MTA TC