Mm01264579_m1

• Gene Symbol: Sox5
• Gene Name: SRY (sex determining region Y)-box 5
• Gene Aliases: A730017D01Rik, AI528773
• Chromosome Location: Chr.6: 143828425 - 144781989 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sox5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001113559.2	NP_001107031.2	9 - 10	1393		75
	NM_001243163.1	NP_001230092.1	9 - 10	1285		75
	NM_011444.3	NP_035574.2	10 - 11	1537		75
GenBank mRNA	AB006330.1	-	10 - 11	1449		75
	AJ010604.1	-	9 - 10	1275		75
	AK015212.1	-	3 - 4	346		75
	AK029047.1	-	12 - 13	1535		75
	AK160154.1	-	3 - 4	351		75
	BC110478.2	-	9 - 10	1277	40047865	75
	KF793916.1	-	10 - 11	1238		75
	X65657.1	-	3 - 4	322		75

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600003397.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sox5

Gene Ontology Categories:

Process(es)

in utero embryonic development
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
central nervous system neuron differentiation
positive regulation of chondrocyte differentiation
cell fate commitment
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
oligodendrocyte differentiation
cartilage development
regulation of timing of neuron differentiation
positive regulation of cartilage development
cellular response to transforming growth factor beta stimulus
positive regulation of mesenchymal stem cell differentiation

Function(s)

RNA polymerase II transcription factor activity, sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
transcription regulatory region DNA binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0600026784.mm.1	TC0600003397.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600026784.mm.1	NM_001113559.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600026784.mm.1	NM_001113559.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0600026784.mm.1	NM_001243163.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600026784.mm.1	NM_001243163.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600026784.mm.1	NM_011444.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600026784.mm.1	NM_011444.3	Refseq