Mm01265942_m1

• Gene Symbol: Nfatc1
• Gene Name: nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
• Gene Aliases: 2210017P03Rik, AI449492, AV076380, NF-ATc, NFAT2, NFATc, Nfatcb
• Chromosome Location: Chr.18: 80606205 - 80713071 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nfatc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001164109.1	NP_001157581.1	2 - 3	1536		65
	NM_001164110.1	NP_001157582.1	2 - 3	1536		65
	NM_001164111.1	NP_001157583.1	2 - 3	1244		65
	NM_001164112.1	NP_001157584.1	2 - 3	1244		65
	NM_016791.4	NP_058071.2	2 - 3	1244		65
	NM_198429.2	NP_940821.1	2 - 3	1536		65
GenBank mRNA	AF049606.1	-	2 - 3	1197		65
	AF087434.1	-	2 - 3	1231		65
	AF239169.1	-	2 - 3	1234		65
	AK004810.1	-	2 - 3	1202		65
	AK048610.1	-	2 - 3	1538		65
	AK144965.1	-	2 - 3	1537		65
	BC061509.1	-	2 - 3	1523	5354603	65
	EU887567.1	-	2 - 3	1231		65
	EU887568.1	-	2 - 3	1231		65
	EU887569.1	-	2 - 3	1189		65
	EU887570.1	-	2 - 3	1231		65
	EU887571.1	-	2 - 3	1189		65
	EU887572.1	-	2 - 3	1189		65

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1800001665.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nfatc1

Gene Ontology Categories:

Process(es)

G1/S transition of mitotic cell cycle
negative regulation of transcription by RNA polymerase II
epithelial to mesenchymal transition
lymphangiogenesis
B-1a B cell differentiation
heart valve morphogenesis
aortic valve morphogenesis
pulmonary valve morphogenesis
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription by RNA polymerase II
transcription by RNA polymerase II
calcium ion transport
heart development
positive regulation of gene expression
transition between fast and slow fiber
osteoclast differentiation
calcineurin-NFAT signaling cascade
intracellular signal transduction
regulation of hair cycle
cell quiescence
negative regulation of osteoblast differentiation
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
ventricular septum morphogenesis
branching involved in lymph vessel morphogenesis
heart trabecula morphogenesis
negative regulation of stem cell proliferation

Function(s)

transcription cis-regulatory region binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
DNA-binding transcription factor activity, RNA polymerase II-specific
transcription coactivator binding
DNA-binding transcription repressor activity, RNA polymerase II-specific
DNA binding
chromatin binding
DNA-binding transcription factor activity
protein binding
transcription factor binding
sequence-specific DNA binding
mitogen-activated protein kinase p38 binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1800011925.mm.1	TC1800001665.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1800011925.mm.1	NM_001164109.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011925.mm.1	NM_001164109.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011925.mm.1	NM_001164110.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011925.mm.1	NM_001164110.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011925.mm.1	NM_198429.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011925.mm.1	NM_198429.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	TC1800001665.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_001164109.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_001164109.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_001164110.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_001164110.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_001164111.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_001164111.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_001164112.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_001164112.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_016791.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_016791.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_198429.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011922.mm.1	NM_198429.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	TC1800001665.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_001164109.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_001164109.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_001164110.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_001164110.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_001164111.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_001164111.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_001164112.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_001164112.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_016791.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_016791.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_198429.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011923.mm.1	NM_198429.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011924.mm.1	TC1800001665.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1800011924.mm.1	NM_001164111.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011924.mm.1	NM_001164111.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011924.mm.1	NM_001164112.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011924.mm.1	NM_001164112.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011924.mm.1	NM_016791.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011924.mm.1	NM_016791.4	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	555708	-	-
ABI Mouse Genome Survey Microarray	821473	-	-