Mm01268624_m1

• Gene Symbol: Crnkl1
• Gene Name: Crn, crooked neck-like 1 (Drosophila)
• Gene Aliases: 1200013P10Rik, 5730590A01Rik, C80326, crn
• Chromosome Location: Chr.2: 145917482 - 145934700 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Crnkl1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_025820.3	NP_080096.1	10 - 11	1406		98
GenBank mRNA	AK004749.1	-	10 - 11	1407		98
	AK012962.1	-	10 - 11	1417		98
	AK020002.1	-	10 - 11	1423		98
	AK088882.1	-	10 - 11	1410		98
	BC029187.1	-	10 - 11	1371	3495255	98

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200004775.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Crnkl1

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

spliceosomal complex assembly
mRNA splicing, via spliceosome
positive regulation of defense response to virus by host
RNA processing
mRNA processing
RNA splicing
mitophagy in response to mitochondrial depolarization

Function(s)

RNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200040854.mm.1	NM_025820.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040854.mm.1	NM_025820.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040854.mm.1	TC0200004775.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200040850.mm.1	NM_025820.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040850.mm.1	NM_025820.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040850.mm.1	TC0200004775.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200040855.mm.1	NM_025820.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040855.mm.1	NM_025820.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040855.mm.1	TC0200004775.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200040852.mm.1	NM_025820.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040852.mm.1	NM_025820.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040852.mm.1	TC0200004775.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200040853.mm.1	NM_025820.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040853.mm.1	NM_025820.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040853.mm.1	TC0200004775.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200040851.mm.1	NM_025820.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040851.mm.1	NM_025820.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200040851.mm.1	TC0200004775.mm.1	MTA TC