Mm01274770_m1

• Gene Symbol: Sox6
• Gene Name: SRY (sex determining region Y)-box 6
• Gene Aliases: AI987981, SOX-LZ
• Chromosome Location: Chr.7: 115470872 - 116040484 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sox6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001025559.3	NP_001020730.1	6 - 7	851		59
	NM_001025560.2	NP_001020731.1	6 - 7	971		59
	NM_001277326.1	NP_001264255.1	5 - 6	826		59
	NM_001277327.1	NP_001264256.1	5 - 6	1006		59
	NM_001277328.1	NP_001264257.1	4 - 5	714		59
	NM_011445.4	NP_035575.1	6 - 7	879		59
GenBank mRNA	AK029696.1	-	4 - 5	641		59
	AK030713.1	-	6 - 7	972		59
	AK048143.1	-	6 - 7	852		59
	AK084290.1	-	6 - 7	1010		59
	AK132409.1	-	5 - 6	792		59
	BC067407.1	-	5 - 6	1003	30094413	59
	D61689.1	-	4 - 5	710		59
	U32614.1	-	6 - 7	883		59

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700004148.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sox6

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
cell morphogenesis
in utero embryonic development
transcription, DNA-templated
regulation of transcription, DNA-templated
multicellular organism development
post-embryonic development
regulation of gene expression
gene silencing
oligodendrocyte cell fate specification
hemopoiesis
erythrocyte differentiation
positive regulation of chondrocyte differentiation
muscle cell differentiation
cell fate commitment
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
astrocyte differentiation
oligodendrocyte differentiation
erythrocyte development
cartilage development
cardiac muscle cell differentiation
positive regulation of cartilage development
cellular response to transforming growth factor beta stimulus
positive regulation of mesenchymal stem cell differentiation

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
sequence-specific DNA binding
transcription regulatory region DNA binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0700034372.mm.1	NM_001025559.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0700034372.mm.1	NM_001025560.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0700034372.mm.1	NM_001277326.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700034372.mm.1	NM_001277327.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700034372.mm.1	NM_001277328.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700034372.mm.1	NM_011445.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0700034372.mm.1	TC0700004148.mm.1	MTA TC