Mm01278138_m1 Best Coverage

• Gene Symbol: Sptlc3
• Gene Name: serine palmitoyltransferase, long chain base subunit 3
• Gene Aliases: C130053K05Rik
• Chromosome Location: Chr.2: 139493913 - 139637674 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sptlc3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_175467.3	NP_780676.1	5 - 6	814		62
GenBank mRNA	AK048374.1	-	4 - 5	675		62
	AK054240.1	-	4 - 5	901		62
	AK078679.1	-	4 - 5	878		62
	AK078686.1	-	5 - 6	815		62
	BC094496.1	-	4 - 5	660	3483569	62

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200002087.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sptlc3

Panther Classification:

Molecular Function -

transaminase

Gene Ontology Categories:

Process(es)

lipid metabolic process
sphingolipid metabolic process
metabolic process
biosynthetic process
sphingoid biosynthetic process

Function(s)

catalytic activity
serine C-palmitoyltransferase activity
transferase activity
transferase activity, transferring acyl groups
pyridoxal phosphate binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200016634.mm.1	NM_175467.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200016634.mm.1	NM_175467.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200016634.mm.1	TC0200002087.mm.1	MTA TC