Clp1
Genomic Map
Back To TopAssay Details
| Gene Symbol: Clp1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_133840.2 | NP_598601.1 | 2 - 3 | 724 | 98 | |
| GenBank mRNA | AK077647.1 | - | 2 - 3 | 701 | 98 | |
| AK145209.1 | - | 699 | 98 | |||
| AK169709.1 | - | 2 - 3 | 733 | 98 | ||
| BC003237.1 | - | 2 - 3 | 724 | 3497802 | 98 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0200003876.mm.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
3' Most
Mammalian Gene Collection
Recommended Assay
Mus musculus
1700
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
mRNA polyadenylation
mRNA cleavage
tRNA splicing, via endonucleolytic cleavage and ligation
mRNA processing
tRNA processing
phosphorylation
cerebellar cortex development
targeting of mRNA for destruction involved in RNA interference
mRNA 3'-end processing
siRNA loading onto RISC involved in RNA interference
nucleotide binding
ATP binding
kinase activity
transferase activity
ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
polynucleotide 5'-hydroxyl-kinase activity
polydeoxyribonucleotide kinase activity
ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity
mRNA polyadenylation
mRNA cleavage
tRNA splicing, via endonucleolytic cleavage and ligation
mRNA processing
tRNA processing
phosphorylation
cerebellar cortex development
targeting of mRNA for destruction involved in RNA interference
mRNA 3'-end processing
siRNA loading onto RISC involved in RNA interference
nucleotide binding
ATP binding
kinase activity
transferase activity
ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
polynucleotide 5'-hydroxyl-kinase activity
polydeoxyribonucleotide kinase activity
ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P21394278 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P21394279 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P21394280 | - | - |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P407193 | BC003237.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P407193 | BC003237.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 737916 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 698799 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 425238 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 18542 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P407193 | BC003237.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P407193 | BC003237.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P407193 | BC003237.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P407193 | BC003237.1 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394292 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394310 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394279 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394296 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394302 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394271 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394265 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394289 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394286 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394282 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394283 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394294 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394268 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394269 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394281 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394300 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394284 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394278 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394304 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394270 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394272 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394275 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394308 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394264 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394299 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394305 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P21394290 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P04591286 | - | - |
| Whole Mouse Genome G4122A | A_51_P407193 | BC003237.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P407193 | BC003237.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P122647 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_67_P04591286 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P01421111 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P01193239 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P01193243 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P01421109 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P01421107 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P21394280 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P21394278 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P21394279 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394310 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394278 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394218 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394203 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394194 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394312 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394326 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394205 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394331 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394299 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394215 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394334 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394257 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394254 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394204 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394216 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394315 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394336 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394318 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394207 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394283 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394265 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394252 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394226 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394332 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394271 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394214 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394329 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394323 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394272 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394284 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394302 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394325 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394314 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394262 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394294 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394212 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394235 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394260 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394320 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394202 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394305 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394221 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394317 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394281 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394251 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394327 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394289 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394199 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394229 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394223 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394269 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394210 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394308 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394328 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394282 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394237 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394195 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394231 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394275 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P21394304 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394279 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394263 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394289 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P02145951 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P02178771 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394272 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P01193244 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P02145947 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394285 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394273 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394269 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P02178767 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394265 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P02178769 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P01176002 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394276 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394257 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394278 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P02250697 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P02100728 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394281 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394252 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394251 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394268 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P21394262 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10484458 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10484459 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10484460 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1423612_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10484457 | - | - |
| Mouse Genome 430 2.0 Array | 1423612_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1423612_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 98985_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 98985_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0200033552.mm.1 | NM_133840.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0200033552.mm.1 | NM_133840.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0200033552.mm.1 | TC0200003876.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1423612_at | - | - |
| Mouse Expression Set 430 | 1423612_PM_at | - | - |
| Murine Genome U74v2 Set | 160672_PM_at | - | - |
| Murine Genome U74v2 Set | 160672_at | - | - |
| Murine Genome U74v2 Set | 170961_at | - | - |
| Murine Genome U74v2 Set | 170961_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1423612_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1423612_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1423612_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1423612_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 321221 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina mouse-6 v1.0 expression beadchip | 1690059 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0001690059 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2620844 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2620844 | - | - |
| mouse-6 v1.1 (Illumina) | scl098985.1_28-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 1690059 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl098985.1_28-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 1690059 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2620844 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2620844 | - | - |
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