Mm01281943_s1 Best Coverage

• Gene Symbol: Sox11
• Gene Name: SRY (sex determining region Y)-box 11
• Gene Aliases: 1110038H03Rik, 6230403H02Rik, AI836553, end1
• Chromosome Location: Chr.12: 27334268 - 27342718 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sox11
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_009234.6	NP_033260.4	1	1594		102
GenBank mRNA	AK146514.1	-	1	1554		102
	AK165005.1	-	1	1594		102
	AK165693.1	-	1	1589		102
	BC053503.1	-	1	1450		102
	BC062095.1	-	1	1397	5716171	102
	BC078643.1	-	1	1579	30144974	102

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Mus musculus, 1700, Inventoried, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sox11

Panther Classification:

Molecular Function -

HMG box transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
skeletal system development
neural tube formation
lens morphogenesis in camera-type eye
outflow tract morphogenesis
cardiac ventricle formation
noradrenergic neuron differentiation
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
translation
multicellular organism development
nervous system development
positive regulation of cell proliferation
positive regulation of gene expression
negative regulation of gene expression
glial cell proliferation
neural crest cell development
spinal cord development
glial cell development
cell differentiation
positive regulation of BMP signaling pathway
positive regulation of hippo signaling
skeletal muscle cell differentiation
positive regulation of neuron differentiation
positive regulation of osteoblast differentiation
positive regulation of ossification
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of hormone secretion
sympathetic nervous system development
embryonic digestive tract morphogenesis
embryonic skeletal system morphogenesis
negative regulation of lymphocyte proliferation
positive regulation of neurogenesis
hard palate development
soft palate development
limb bud formation
negative regulation of glial cell proliferation
ventricular septum morphogenesis
lung morphogenesis
negative regulation of cell death
neuroepithelial cell differentiation
eyelid development in camera-type eye
somite development
cornea development in camera-type eye
closure of optic fissure
positive regulation of stem cell proliferation
negative regulation of transcription regulatory region DNA binding
positive regulation of lens epithelial cell proliferation

Function(s)

transcription regulatory region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II transcription coactivator activity
enhancer sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
translation factor activity, RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1200010812.mm.1	NM_009234.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010812.mm.1	NM_009234.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010812.mm.1	TC1200001562.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200010814.mm.1	NM_009234.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010814.mm.1	NM_009234.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010814.mm.1	TC1200001562.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200010818.mm.1	NM_009234.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010818.mm.1	NM_009234.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010818.mm.1	TC1200001562.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200010817.mm.1	NM_009234.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010817.mm.1	NM_009234.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010817.mm.1	TC1200001562.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200010811.mm.1	NM_009234.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010811.mm.1	NM_009234.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010811.mm.1	TC1200001562.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200010813.mm.1	NM_009234.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010813.mm.1	NM_009234.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010813.mm.1	TC1200001562.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200010816.mm.1	NM_009234.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010816.mm.1	NM_009234.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1200010816.mm.1	TC1200001562.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	604810	-	-