Mm01285838_m1

• Gene Symbol: Cntn2
• Gene Name: contactin 2
• Gene Aliases: D130012K04Rik, TAG-1, Tax
• Chromosome Location: Chr.1: 132509425 - 132543251 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cntn2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_177129.5	NP_796103.2	1 - 2	215		69
GenBank mRNA	AK147573.1	-	1 - 2	141		69
	AK147602.1	-	1 - 2	216		69
	AK147658.1	-	1 - 2	141		69
	AK147673.1	-	1 - 2	166		69
	BC066106.1	-	1 - 2	135	30362931	69
	CJ098637.1	-	1 - 2	216		69

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100003079.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK147602.1, AK147673.1, BC066106.1, NM_177129.5 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, G-protein coupled receptor, Mammalian Gene Collection, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cntn2

Gene Ontology Categories:

Process(es)

microtubule cytoskeleton organization
neuron migration
cell adhesion
cell-matrix adhesion
axonogenesis
axon guidance
axonal fasciculation
learning
adult walking behavior
regulation of cell morphogenesis involved in differentiation
positive regulation of protein processing
cerebral cortex GABAergic interneuron migration
central nervous system myelination
regulation of axon diameter
neuron projection development
receptor internalization
clustering of voltage-gated potassium channels
negative regulation of neuron differentiation
regulation of neuronal synaptic plasticity
regulation of astrocyte differentiation
positive regulation of adenosine receptor signaling pathway
protein localization to juxtaparanode region of axon
establishment of protein localization to juxtaparanode region of axon
presynaptic membrane organization

Function(s)

protein binding
carbohydrate binding
protein self-association

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100024727.mm.1	TC0100003079.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100024727.mm.1	NM_177129.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100024727.mm.1	NM_177129.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0100024725.mm.1	TC0100003079.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100024725.mm.1	NM_177129.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100024725.mm.1	NM_177129.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0100024726.mm.1	TC0100003079.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100024726.mm.1	NM_177129.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100024726.mm.1	NM_177129.5	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	440060	-	-