Mm01289809_g1

• Gene Symbol: Psma6
• Gene Name: proteasome (prosome, macropain) subunit, alpha type 6
• Gene Aliases: IOTA
• Chromosome Location: Chr.12: 55384217 - 55418459 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Psma6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_011968.3	NP_036098.1	2 - 3	266		74
GenBank mRNA	AF060087.1	-	2 - 3	175		74
	AK088143.1	-	2 - 3	204		74
	AK161662.1	-	2 - 3	205		74
	BC086685.1	-	2 - 3	193	30681804	74
	BY340104.1	-	2 - 3	316		74
	U60288.1	-	2 - 3	208		74

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200000467.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Protease, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Psma6

Panther Classification:

Molecular Function -

protease

Gene Ontology Categories:

Process(es)

proteolysis
ubiquitin-dependent protein catabolic process
skeletal muscle tissue development
proteasomal ubiquitin-independent protein catabolic process
proteasome-mediated ubiquitin-dependent protein catabolic process
positive regulation of NF-kappaB transcription factor activity
proteolysis involved in cellular protein catabolic process

Function(s)

RNA binding
endopeptidase activity
threonine-type endopeptidase activity
peptidase activity
hydrolase activity
NF-kappaB binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1200003234.mm.1	NM_011968.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200003234.mm.1	NM_011968.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200003234.mm.1	TC1200000467.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200003235.mm.1	NM_011968.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200003235.mm.1	NM_011968.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200003235.mm.1	TC1200000467.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200003237.mm.1	NM_011968.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200003237.mm.1	NM_011968.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200003237.mm.1	TC1200000467.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200003238.mm.1	NM_011968.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200003238.mm.1	NM_011968.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200003238.mm.1	TC1200000467.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200003239.mm.1	NM_011968.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200003239.mm.1	NM_011968.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200003239.mm.1	TC1200000467.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	446187	-	-