Gm16880
Genomic Map
Back To TopAssay Details
| Gene Symbol: Gm16880 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_037986.1 | 3 - 4 | 395 | 75 | ||
| GenBank mRNA | AK051055.1 | - | 3 - 4 | 395 | 75 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream |
predicted gene, 19705 |
Gm19705 | -33.8kb | Sense | Chr. 1 - 136683396 - 136690805 on NCBI Build GRCm38 | |
| Downstream |
nuclear receptor subfamily 5, group A, member 2 |
Nr5a2 |
AU020803, D1Ertd308e, Ftf, LRH-1, UF2-H3B |
117.7kb | Anti-sense | Chr. 1 - 136842562 - 136960448 on NCBI Build GRCm38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0100001276.mm.1Set Membership: |
Amplicon length between 71 and 85
3' Most
Detect Genomic DNA
Mus musculus
1700
Probe spans exons
|
MicroArray Probes:
Agilent
Affymetrix
ABI
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 918968 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 180562 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 947160 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 867542 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 178237 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 179726 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 46950 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 518367 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 802993 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 29085 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P116133 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P00195912 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P116133 | - | - |
| Whole Mouse Genome G4122A | A_52_P545512 | AK086995.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P108819 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P116133 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647470 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00243592 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00552503 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00552506 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00837670 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647528 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647472 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00736774 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00837681 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647336 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P01014325 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00243597 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647399 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647455 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647508 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647537 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647352 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647350 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647459 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647369 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00023239 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647506 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647343 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647505 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647444 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647374 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647462 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00584465 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00837665 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00443841 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647521 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00597648 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00419174 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647489 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00584464 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647503 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647547 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647344 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647391 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647429 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647323 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647355 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647342 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647431 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647532 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647367 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647357 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647492 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00443842 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00988145 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647347 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00638264 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647427 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647341 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00988140 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647466 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00475225 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647543 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647354 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647388 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00504088 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00210464 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647345 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647548 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647467 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647371 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647338 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00552504 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00023249 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647435 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647464 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00736771 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00514680 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647351 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647394 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647519 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647484 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647389 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00210472 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647372 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00893079 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647541 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00988141 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647448 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647520 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00419172 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00616043 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647524 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00030462 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00096182 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647449 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00337357 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00864742 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647360 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647493 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647386 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647370 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00616045 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647379 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647425 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647376 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647551 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647496 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00837669 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00030464 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00736773 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P01004353 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647504 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647436 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647485 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647358 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00837325 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647396 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647517 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647539 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647491 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P20647511 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P00736772 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Clariom S Array | PSR0100010634.mm.1 | TC0100001276.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0100010634.mm.1 | NR_037986.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0100010634.mm.1 | NR_037986.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0100010635.mm.1 | TC0100001276.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0100010635.mm.1 | NR_037986.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0100010635.mm.1 | NR_037986.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0100010633.mm.1 | TC0100001276.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0100010633.mm.1 | NR_037986.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0100010633.mm.1 | NR_037986.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 431744 | - | - |
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