Mm01292170_g1 Best Coverage

• Gene Symbol: Vcpkmt
• Gene Name: valosin containing protein lysine (K) methyltransferase
• Gene Aliases: Gm71, Mettl21d, Mettl221d, VCP-KMT
• Chromosome Location: Chr.12: 69576730 - 69583109 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vcpkmt
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001033236.2	NP_001028408.2	1 - 2	306		115
GenBank mRNA	AK144832.1	-	1 - 2	269		115
	BC138942.1	-	1 - 2	388	8861964	115
	BC138943.1	-	1 - 2	388	8861965	115
	BC145471.1	-	1 - 2	388		115
	BY095246.1	-	1 - 2	307		115

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200001868.mm.1

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Mus musculus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

peptidyl-lysine trimethylation
methylation

Function(s)

rRNA (adenine-N6,N6-)-dimethyltransferase activity
protein C-terminal carboxyl O-methyltransferase activity
tRNA (guanine-N2-)-methyltransferase activity
methyltransferase activity
C-methyltransferase activity
N-methyltransferase activity
O-methyltransferase activity
S-methyltransferase activity
RNA methyltransferase activity
mRNA methyltransferase activity
tRNA methyltransferase activity
protein methyltransferase activity
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
rRNA methyltransferase activity
rRNA (uridine-2'-O-)-methyltransferase activity
rRNA (adenine-N6-)-methyltransferase activity
DNA-methyltransferase activity
tRNA (guanine-N1-)-methyltransferase activity
rRNA (cytosine-C5-)-methyltransferase activity
selenocysteine methyltransferase activity
arginine N-methyltransferase activity
protein-arginine N-methyltransferase activity
lysine N-methyltransferase activity
protein-lysine N-methyltransferase activity
tRNA (uracil) methyltransferase activity
tRNA (guanine) methyltransferase activity
tRNA (adenine) methyltransferase activity
tRNA (cytosine) methyltransferase activity
tRNA (cytosine-5-)-methyltransferase activity
tRNA (adenine-N1-)-methyltransferase activity
rRNA (adenine) methyltransferase activity
rRNA (cytosine) methyltransferase activity
rRNA (guanine) methyltransferase activity
rRNA (uridine) methyltransferase activity
transferase activity
protein C-terminal leucine carboxyl O-methyltransferase activity
1-phenanthrol methyltransferase activity
protein-arginine N5-methyltransferase activity
methylarsonite methyltransferase activity
dimethylarsinite methyltransferase activity
4,5-dihydroxybenzo(a)pyrene methyltransferase activity
1-hydroxypyrene methyltransferase activity
1-hydroxy-6-methoxypyrene methyltransferase activity
demethylmenaquinone methyltransferase activity
cobalt-precorrin-6B C5-methyltransferase activity
cobalt-precorrin-7 C15-methyltransferase activity
cobalt-precorrin-5B C1-methyltransferase activity
cobalt-precorrin-3 C17-methyltransferase activity
dimethylamine methyltransferase activity
hydroxyneurosporene-O-methyltransferase activity
tRNA (adenine-57, 58-N(1)-) methyltransferase activity
methylamine-specific methylcobalamin:coenzyme M methyltransferase activity
trimethylamine methyltransferase activity
methanol-specific methylcobalamin:coenzyme M methyltransferase activity
monomethylamine methyltransferase activity
P-methyltransferase activity
Se-methyltransferase activity
2-phytyl-1,4-naphthoquinone methyltransferase activity
tRNA (uracil-2'-O-)-methyltransferase activity
tRNA (cytosine-2'-O-)-methyltransferase activity
phosphomethylethanolamine N-methyltransferase activity
tRNA (cytosine-3-)-methyltransferase activity
rRNA (cytosine-2'-O-)-methyltransferase activity
rRNA (cytosine-N4-)-methyltransferase activity
trihydroxyferuloyl spermidine O-methyltransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1200012717.mm.1	NM_001033236.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012717.mm.1	NM_001033236.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012717.mm.1	TC1200001868.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200012719.mm.1	TC1200001868.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200012718.mm.1	NM_001033236.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012718.mm.1	NM_001033236.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012718.mm.1	TC1200001868.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	896444	-	-