Mm01295595_m1 Best Coverage

• Gene Symbol: Stx6
• Gene Name: syntaxin 6
• Gene Aliases: 2310039E05Rik, 2410005I16Rik, AA437559, AI415714, AI845861
• Chromosome Location: Chr.1: 155158677 - 155207659 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Stx6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_021433.3	NP_067408.1	4 - 5	553		58
GenBank mRNA	AF237814.1	-	4 - 5	363		58
	AK009690.1	-	4 - 5	508		58
	AK018167.1	-	4 - 5	541		58
	AK019106.1	-	4 - 5	515		58
	AK031673.1	-	4 - 5	532		58
	AK044905.1	-	4 - 5	514		58
	AK049124.1	-	4 - 5	513		58
	AK151549.1	-	4 - 5	507		58
	AK159392.1	-	4 - 5	525		58
	AK179436.1	-	3 - 4	201		58
	BC029205.1	-	4 - 5	470	4039560	58
	BQ749205.1	-	4 - 5	526		58

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100001397.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Stx6

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Process(es)

transport
intracellular protein transport
vesicle fusion
endosome organization
protein transport
vesicle-mediated transport
regulation of protein localization
retrograde transport, endosome to Golgi
Golgi vesicle transport
Golgi ribbon formation

Function(s)

SNAP receptor activity
protein binding
syntaxin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100011531.mm.1	NM_021433.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100011531.mm.1	NM_021433.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0100011531.mm.1	TC0100001397.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	580166	-	-