Mm01296881_m1

• Gene Symbol: Sptlc2
• Gene Name: serine palmitoyltransferase, long chain base subunit 2
• Gene Aliases: AI173915, LCB2, mKIAA0526
• Chromosome Location: Chr.12: 87307889 - 87388230 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sptlc2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_011479.3	NP_035609.1	10 - 11	1491		64
GenBank mRNA	AK044917.1	-	10 - 11	1492		64
	AK057644.1	-	10 - 11	1527		64
	AK080181.1	-	4 - 5	1689		64
	AK089019.1	-	10 - 11	1485		64
	AK133728.1	-	4 - 5	552		64
	AK139681.1	-	2 - 3	194		64
	AK159346.1	-	10 - 11	1492		64
	AK172965.1	-	3 - 4	287		64
	BC003227.1	-	10 - 11	1524	3483158	64
	U27455.1	-	10 - 11	1459		64
	X95642.1	-	10 - 11	1462		64

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200002122.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sptlc2

Panther Classification:

Molecular Function -

transaminase

Gene Ontology Categories:

Process(es)

lipid metabolic process
sphingolipid metabolic process
sphingomyelin biosynthetic process
metabolic process
biosynthetic process
sphinganine biosynthetic process
sphingosine biosynthetic process
ceramide biosynthetic process

Function(s)

catalytic activity
serine C-palmitoyltransferase activity
transferase activity
transferase activity, transferring acyl groups
pyridoxal phosphate binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1200014749.mm.1	NM_011479.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014749.mm.1	TC1200002122.mm.1	MTA TC