Mm01302427_m1 Best Coverage

• Gene Symbol: Ccl5
• Gene Name: chemokine (C-C motif) ligand 5
• Gene Aliases: MuRantes, RANTES, SISd, Scya5, TCP228
• Chromosome Location: Chr.11: 83525778 - 83530518 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ccl5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_013653.3	NP_038681.2	1 - 2	127		103
GenBank mRNA	AF065944.1	-	1 - 2	103		103
	AF065945.1	-	1 - 2	103		103
	AF065946.1	-	1 - 2	103		103
	AF065947.1	-	1 - 2	103		103
	AF128187.1	-	1 - 2	103		103
	AK003101.1	-	1 - 2	128		103
	AK158074.1	-	1 - 2	123		103
	AY722103.1	-	1 - 2	70		103
	BC033508.1	-	1 - 2	110	4925413	103
	CT010315.1	-	1 - 2	70		103
	M77747.1	-	1 - 2			103
	S37648.1	-	1 - 2			103

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1100003396.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ccl5

Panther Classification:

Molecular Function -

cytokine, intercellular signal molecule

Gene Ontology Categories:

Process(es)

MAPK cascade
positive regulation of defense response to virus by host
calcium ion transport
cellular calcium ion homeostasis
exocytosis
chemotaxis
inflammatory response
immune response
leukocyte cell-cell adhesion
G-protein coupled receptor signaling pathway
cell-cell signaling
response to toxic substance
positive regulation of gene expression
positive regulation of macrophage chemotaxis
positive regulation of T cell chemotaxis
positive regulation of phosphatidylinositol 3-kinase signaling
positive regulation of smooth muscle cell migration
positive regulation of cell migration
pseudopodium assembly
positive regulation of cellular biosynthetic process
activation of phospholipase D activity
positive regulation of fever generation
lipopolysaccharide-mediated signaling pathway
positive regulation of cell-cell adhesion mediated by integrin
response to cytokine
positive regulation of homotypic cell-cell adhesion
response to interferon-gamma
response to tumor necrosis factor
T-helper 1 cell diapedesis
positive regulation of T cell proliferation
neutrophil activation
positive regulation of phosphorylation
positive regulation of tyrosine phosphorylation of STAT protein
protein kinase B signaling
cellular protein complex assembly
negative regulation by host of viral transcription
negative regulation of viral genome replication
positive regulation of neuron differentiation
positive regulation of osteoclast differentiation
negative regulation of G-protein coupled receptor protein signaling pathway
positive regulation of angiogenesis
positive regulation of cell adhesion
eosinophil chemotaxis
lymphocyte chemotaxis
positive regulation of smooth muscle cell proliferation
positive regulation of epithelial cell proliferation
regulation of insulin secretion
regulation of T cell activation
positive chemotaxis
protein tetramerization
positive regulation of calcium ion transport
negative regulation of cell death
positive regulation of mast cell chemotaxis
positive regulation of protein tyrosine kinase activity
chemokine-mediated signaling pathway
negative regulation of chemokine-mediated signaling pathway
negative regulation of T cell apoptotic process
positive regulation of T cell apoptotic process
cellular response to organic cyclic compound
positive regulation of monocyte chemotaxis
extracellular negative regulation of signal transduction
regulation of neuron death
negative regulation of neuron death
negative regulation of macrophage apoptotic process
negative regulation of receptor activity
positive regulation of chemokine (C-X-C motif) ligand 2 production
positive regulation of T cell migration
positive regulation of natural killer cell chemotaxis

Function(s)

phosphatidylinositol phospholipase C activity
protein kinase activity
cytokine activity
chemokine activity
heparin binding
phospholipase activator activity
receptor signaling protein tyrosine kinase activator activity
CCR1 chemokine receptor binding
CCR5 chemokine receptor binding
chemoattractant activity
chemokine receptor binding
protein homodimerization activity
protein self-association
chemokine receptor antagonist activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1100031120.mm.1	NM_013653.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100031120.mm.1	NM_013653.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1100031120.mm.1	TC1100003396.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100031121.mm.1	NM_013653.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100031121.mm.1	NM_013653.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1100031121.mm.1	TC1100003396.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	516139	-	-