Mm01320970_m1 Best Coverage

• Gene Symbol: Vcam1
• Gene Name: vascular cell adhesion molecule 1
• Gene Aliases: CD106, Vcam-1
• Chromosome Location: Chr.3: 116110020 - 116129688 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vcam1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_011693.3	NP_035823.3	2 - 3	656		71
GenBank mRNA	AK016465.1	-	2 - 3	426		71
	AK030195.1	-	2 - 3	426		71
	AK143401.1	-	2 - 3	426		71
	AK162954.1	-	2 - 3	426		71
	BC011159.1	-	2 - 3	398	4206476	71
	BC029823.1	-	2 - 3	656	4196681	71
	CT010373.1	-	2 - 3	335		71
	L08431.1	-	2 - 3	395		71
	M84487.1	-	2 - 3	392		71
	U12884.1	-	2 - 3	378		71
	X67783.1	-	2 - 3	350		71

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300002802.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vcam1

Gene Ontology Categories:

Process(es)

cell adhesion
heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
leukocyte cell-cell adhesion
cell-matrix adhesion
heart development
amine metabolic process
viral process
single organismal cell-cell adhesion
positive regulation of T cell proliferation
leukocyte tethering or rolling
oxidation-reduction process
cell chemotaxis
embryonic placenta morphogenesis
chorio-allantoic fusion
visceral serous pericardium development
cellular response to glucose stimulus

Function(s)

integrin binding
primary amine oxidase activity
cell adhesion molecule binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300022053.mm.1	NM_011693.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022053.mm.1	NM_011693.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022053.mm.1	TC0300002802.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022055.mm.1	NM_011693.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022055.mm.1	NM_011693.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022055.mm.1	TC0300002802.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022056.mm.1	NM_011693.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022056.mm.1	NM_011693.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022056.mm.1	TC0300002802.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022054.mm.1	NM_011693.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022054.mm.1	NM_011693.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022054.mm.1	TC0300002802.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	511891	-	-