Mm01337414_gH Best Coverage

• Gene Symbol: Gtf2a1
• Gene Name: general transcription factor II A, 1
• Gene Aliases: 6330549H03Rik, AA536742, AA959775, AW060250, TfIIAa/b, Tfiia1
• Chromosome Location: Chr.12: 91555262 - 91590487 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gtf2a1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031391.2	NP_113568.2	6 - 7	706		65
	NM_175335.3	NP_780544.1	6 - 7	693		65
GenBank mRNA	AF250834.1	-	6 - 7	636		65
	AK048711.1	-	6 - 7	694		65
	AK139996.1	-	6 - 7	706		65
	BC079909.1	-	6 - 7	639	30658355	65
	BC117829.1	-	6 - 7	663	40092917	65
	BC117830.1	-	6 - 7	663	40092921	65

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200002152.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Gtf2a1

Panther Classification:

Molecular Function -

general transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
transcription initiation from RNA polymerase II promoter

Function(s)

RNA polymerase II repressing transcription factor binding
DNA binding
transcription coactivator activity
protein binding
transcription factor binding
TBP-class protein binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1200014954.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014954.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014954.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014954.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014954.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014966.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014966.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014966.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014953.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014953.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014953.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014953.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014953.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014960.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014960.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014960.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014960.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014960.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014961.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014961.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014961.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014961.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014961.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014962.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014962.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014962.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014962.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014962.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014950.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014950.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014950.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014950.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014950.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014957.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014957.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014957.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014957.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014957.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014963.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014963.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014963.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014963.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014963.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014970.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014970.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014970.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014952.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014952.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014952.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014952.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014952.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014955.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014955.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014955.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014955.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014955.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014971.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014971.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014971.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014956.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014956.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014956.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014956.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014956.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014958.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014958.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014958.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014958.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014958.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014959.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014959.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014959.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014959.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014959.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014965.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014965.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014965.mm.1	NM_175335.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014965.mm.1	NM_175335.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014965.mm.1	TC1200002152.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200014967.mm.1	NM_031391.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014967.mm.1	NM_031391.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200014967.mm.1	TC1200002152.mm.1	MTA TC