Name: [Mm01337446_m1] [Rnf44]
Creator: Thermo Fisher Scientific
Keywords: [Rnf44] Assay, [ring finger protein 44] Assay

Assay Details

Gene Symbol: Rnf44
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027395.1		1 - 2	238		105
RefSeq	NR_027396.1		1 - 2	238		105
GenBank mRNA	BC017630.1	-	1 - 2	114	4507289	105
	BC035548.1	-	1 - 2	136	4221284	105
	CJ147978.1	-	1 - 2	99		105

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BY074150.1	-	1 - 2	100	Chr. 13 - 54683969 - 54693821 [-] on Build GRCm38	105
GenBankmRNA	BY008426.1	-	1 - 2	103	Chr. 13 - 54683993 - 54693825 [-] on Build GRCm38	105
GenBankmRNA	BF321966.1	-	1 - 2	111	Chr. 13 - 54683632 - 54693833 [-] on Build GRCm38	105
GenBankmRNA	BY007210.1	-	1 - 2		Chr. 13 - 54684370 - 54693813 [-] on Build GRCm38	106
GenBankmRNA	CJ180893.1	-	1 - 2	159	Chr. 13 - 54683984 - 54693879 [-] on Build GRCm38	105
GenBankmRNA	BY722280.1	-	1 - 2	78	Chr. 13 - 54683097 - 54693800 [-] on Build GRCm38	105
GenBankmRNA	BY253115.1	-	1 - 2	79	Chr. 13 - 54683654 - 54693800 [-] on Build GRCm38	105
GenBankmRNA	BY794562.1	-	1 - 2	128	Chr. 13 - 54684041 - 54693850 [-] on Build GRCm38	105
GenBankmRNA	CK791638.1	-	1 - 2	124	Chr. 13 - 54683113 - 54693846 [-] on Build GRCm38	105
GenBankmRNA	CJ176406.1	-	1 - 2	161	Chr. 13 - 54683717 - 54693882 [-] on Build GRCm38	105
GenBankmRNA	BY124778.1	-	1 - 2	90	Chr. 13 - 54684007 - 54693811 [-] on Build GRCm38	105

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	Fas associated factor family member 2	Faf2	2210404D11Rik, AI462440, Ubxd8, mKIAA0887	-20.3kb	Anti-sense	Chr. 13 - 54621775 - 54664063 on NCBI Build GRCm38
Downstream	cadherin-related family member 2	Cdhr2	Gm624, PC-LKC, Pcdh24	7.6kb	Anti-sense	Chr. 13 - 54701463 - 54736662 on NCBI Build GRCm38

More Information

Additional Information:

This assay is in the 5'UTR region of the BC017630.1, BC035548.1 transcripts.

Set Membership:

Amplicon length greater than or equal to 101

Mammalian Gene Collection

Mus musculus

Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NM_001146025.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NM_001146025.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NM_001146026.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NM_001146026.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NM_001146027.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NM_001146027.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NM_134064.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NM_134064.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NR_027395.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NR_027395.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NR_027396.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	NR_027396.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012774.mm.1	TC1300002038.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300012788.mm.1	NR_027395.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012788.mm.1	NR_027395.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012788.mm.1	NR_027396.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012788.mm.1	NR_027396.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012788.mm.1	TC1300002038.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300012794.mm.1	NR_027395.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012794.mm.1	NR_027395.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012794.mm.1	NR_027396.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012794.mm.1	NR_027396.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012794.mm.1	TC1300002038.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300012793.mm.1	NR_027395.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012793.mm.1	NR_027395.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012793.mm.1	NR_027396.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012793.mm.1	NR_027396.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300012793.mm.1	TC1300002038.mm.1	MTA TC

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Catalog #	4426961
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Genomic Map